Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01007 ATGGCAAGAACAGTTGCAGCTTCTGAAATAaagactaataaaaactatgaagttttcttgagtttcaggggtaaagacacgcgtgaaacattcacagggtatctctatgaagctttgtgccgcgagggaatcatcaccttcatggatgatgaatatctaacagaaggagaaacaattcgacctcaactcttcaaagccattgaagactcaaaggtttcaatcgttgttttctctgaaaattacgcaacctcagcatggtgtcttgatgagcttgtcaagatcctccaatgtcacaaggagaagaaccagctcgtttttccaatcttctacaaagtagagccctctgatgtaaggcatcagaataatagttacaagcaagccATGGATGCTCATGAAATTAGGTATTGTTATGAGTCTCACAAGGTTCAGAAGTGGAAGGAAGCTTTGGCTGAAATCTCCAACATGAAAGGGTTTCATTTGACACAAGGCTATGAATTTGAGTTTATTCAAGATATTGTGAACAAGATCAGTACTAAAGTATCTGCTAAGCAACTGCCCATTGAGGAGCATGTAGTTGGATTGCAATACCAAGTTGCAAGACTGAAGTCCATTCTAGATATTGAGTCTAATGACAACACATTCATGTTAGGGATTCTTGGAATCGGCGGAATTGGCAAAACAACACTTGCAAAAGCTTTGTATAACTCTCTCTGCAATCAGTTTGAAGGTGCTTGTTTTCTTTTCAATGTGAGAGAAACTTCAAGTCAAGAAAAGGGTAAAGTATGCCTACAACAAATGCTACTGTCAAAAATTCTTCAGAAGGGAAAAGTCAAGTTGGGCAGTGTTGATGAAGGAATCTCCACATTAAAAGAGAGACTTTGCACAAAAAGAGTTCTTATGGTTCTTGATGATGTTGATAAAATTGAACAGTTACAAGCACTAGCAGGAGGATGTGCTTGGTTTGGTTCTGGAAGTAGGATTATCATAACGACAAGGGATAAATATTTGCTAGCAGTTCATCAGGTCAAAAGGATTTATAATATGCCAATGCTAAATGAACATGATTCTCTCCAGCTGTTTTGTCAGAATGCATTCAAAACTAGTAGCCCGCCCACAAACTATGTAGACATGTGCAATCGAGCAATTCGATATGCCAAAGGCCTTGCATTAGCTTTAAAAGTTATAGGCTCGAATTTGATTGACAAAGATTTGAAAGAGGGGAAGTCTGCACTGGACAAATATGAAAAGAATCCTCATATAGATATTCAAAGTATTCTTAGAATAAGCTATGACAGTCTGCAGCACAATGAAAAGGAGATTTTCCTTGACATAGCATGCTTCTTTAATGGAATGAGATTGGATTATGTTAAAAGAATACTAGATGGGTGTGGATTCTACTCAGAAGATGGTATCAGAATATTAATTGATAAATCTCTCATAGCTATTGAACATGGTTACTTGAGGATGCATGACTTAATAAAGGACATGGGTAGAGACATTGTTAAGCAGGAGGCACCAAAAGAAGCCGGCGAACGAAGCAGATTATGGTTTCGAGAAGATGTTCTTGAAGTACTAACAAAAAATACAGGAAGTGCTAAAATTGAAGGTATAAAGCTTGATTTGCCAGAAGGGGTTAATTGGAGTGATACTGTCTTTAAGAAGATGAAGAAACTTAGGATTCTTATCGTTCGAAACACGAGTTTCCCATCTTGGCCTATTTATCTGCCGAATCAATTAAAGCTGCTTGATTGGAAGGGATATCCTTCAAAATCCCTTCCACCTGGCTTTTATCCCGAGCAAATTGCTGCCTTCAATTTACGCTTTAGTCTTCTTGTATTGAAAAGGCCATTTCAGAAATTTGATCATTTGACCTACATGAATTTCTCTTGCTGTCAGTCCATCACTAAATTCCCTGATGTGTCTGGAGCAAAAAGTTTAAGAGAATTGATACTTGATCGTTGTAAGAAACTGGTTAAGGTTGATGACTCAATTGGTTTTCTTCCTAACCTTGTTTATTTGAGTGCTTCAGAATGCACTCAACTGAGGAGTTTTCTGCCTCAAATCTCTTTGCCATCTCTTGAATATCTTAGCTTTGACTTGTGTAGTAGACTTGCACATTTCCCAGATATACTGGGAAAGAATGATAAGCCATTAAAAATTTCTCTGAGACATACTGCTTTAAGAGAGCTTTCAGATTCTTTTGCTGAACTTAGTGGACTTGGCTATTTAGATATGACAGGTTGTAAGGAACTAAAATATCTACCAAGTAGCTTGTTTATGTTGCCAAATTTTGTCACCTTAAAAATTGGAGGATGTTCCCAACTTCGAGAATTATTAACAAGTTTCAAAGGAAGGCTTTCTGAAGCAGAGCACCGGCCAAAGTTAGAGACCTTGGATTTTAGCAATGCATGTTTGTCAAATGAAGATCTTCATGTAATTATGCAGAGTTTTCCAAACTTGAAAGACTTAAACGTATTGTCAAACTATTTTGTGTCATGCCCAGAAAGCATTAAAAAGTCTATTTGCTTGAGAAGTCTTGATGTGAGCTACTGCCTTAAGCTTCAAGAAATTCCAGAACTTCCCTCTAACGTTCAAAAATTAAATGCAAGACATTGCAATTCCTTGACAGCAGATACGTCAAGCATGCTATGGTCACAGGTGTGTAAAGAGATAAACAAATTACAAGTCTTGATGCCACAGACAGATATTCCAGATTGGTTCGACTATCGTGATCAAGGCGGAATTCCCATCTTCTGGGCACGTTGCAAGTTCCCTGCTGTGGCTCTAGCATTCATGTTTGGCAAAATGAACTACCAAGAAGTTGAGCTTCACTTGTTTATCGACAGCGAGCATGTAAATGTCCAGCGCCAACACAAGCATACTTTAAATATTGCAGAAAATCATGTTCTTCTGTGTGACCTTCGAGCTTTCTTCAACGATGAGGAATGGGAGAGGCTTGATGCACGCATTGGACATGATAATAACTGGAAGCAAGTTCAGGTGGTGTGTGAACCAGACACAAGCCTAAGAGAATGGGGAGTGTATGTGTACAAAAAAGAAACAAACATGAATGATATCCAATTCACATGTCCATATCCTGAGTCCTCAAAGCTACAATCCTTGCTAGTTATTACAAATACTAAAACCATATCAAGAGAGGATGATATGGAAATAGAAAGTGCAAGGGCTTCTTCAAGCTCAGTTGAAGAGACATCAGCTAGTATTGTACAAGCTTTAGAAGCATCATACTCAAAACATGGTGTGCTACATGTTAATTCAAATAGTTGTGCTCAAACTTGTAGCCTCTGTTGCTCAGCATTACTTTCAAGTTACAGGAGACTGCTTTGCTGTACCTGCAGATGTAGGATTGATGATGATGAGCCTTGTGGAGAAGCACGGATGACAAAGGCGCAGCCAGCGCGACTCATGCTAGATGATAATTTAAATTGTTGTGCTCAATCCTGTAGCCTCTGCTTCTCAGCATTACTTTCAAGTTTCAGGAGACTGCTTTGTGGTATCTGTAGTAGGCTTGATAATGATGAGCCTTATGGAGAAGTAAAGATGACAAAGGCACAGCCAGGGCCAATGATTTCAAGACCACAAGAAGAATCAACTGAAAATGTTGATGAGGAGCGTGTTCCTTCTTCCTTCTCACACAGCCTACAAACTGTGGTGGAAAACTTGAAGAGGCTTACAGCTCCAAGAGAAGACAAAGGTTGGAGCCATGGAGAAGACTGTTATAACTCAGAATTGAGTGATGTTGATTTTGAGGACGATGGGGAAGGAGACTTGGACATGGAAGCATAG 3807 0.3533 MARTVAASEIKTNKNYEVFLSFRGKDTRETFTGYLYEALCREGIITFMDDEYLTEGETIRPQLFKAIEDSKVSIVVFSENYATSAWCLDELVKILQCHKEKNQLVFPIFYKVEPSDVRHQNNSYKQAMDAHEIRYCYESHKVQKWKEALAEISNMKGFHLTQGYEFEFIQDIVNKISTKVSAKQLPIEEHVVGLQYQVARLKSILDIESNDNTFMLGILGIGGIGKTTLAKALYNSLCNQFEGACFLFNVRETSSQEKGKVCLQQMLLSKILQKGKVKLGSVDEGISTLKERLCTKRVLMVLDDVDKIEQLQALAGGCAWFGSGSRIIITTRDKYLLAVHQVKRIYNMPMLNEHDSLQLFCQNAFKTSSPPTNYVDMCNRAIRYAKGLALALKVIGSNLIDKDLKEGKSALDKYEKNPHIDIQSILRISYDSLQHNEKEIFLDIACFFNGMRLDYVKRILDGCGFYSEDGIRILIDKSLIAIEHGYLRMHDLIKDMGRDIVKQEAPKEAGERSRLWFREDVLEVLTKNTGSAKIEGIKLDLPEGVNWSDTVFKKMKKLRILIVRNTSFPSWPIYLPNQLKLLDWKGYPSKSLPPGFYPEQIAAFNLRFSLLVLKRPFQKFDHLTYMNFSCCQSITKFPDVSGAKSLRELILDRCKKLVKVDDSIGFLPNLVYLSASECTQLRSFLPQISLPSLEYLSFDLCSRLAHFPDILGKNDKPLKISLRHTALRELSDSFAELSGLGYLDMTGCKELKYLPSSLFMLPNFVTLKIGGCSQLRELLTSFKGRLSEAEHRPKLETLDFSNACLSNEDLHVIMQSFPNLKDLNVLSNYFVSCPESIKKSICLRSLDVSYCLKLQEIPELPSNVQKLNARHCNSLTADTSSMLWSQVCKEINKLQVLMPQTDIPDWFDYRDQGGIPIFWARCKFPAVALAFMFGKMNYQEVELHLFIDSEHVNVQRQHKHTLNIAENHVLLCDLRAFFNDEEWERLDARIGHDNNWKQVQVVCEPDTSLREWGVYVYKKETNMNDIQFTCPYPESSKLQSLLVITNTKTISREDDMEIESARASSSSVEETSASIVQALEASYSKHGVLHVNSNSCAQTCSLCCSALLSSYRRLLCCTCRCRIDDDEPCGEARMTKAQPARLMLDDNLNCCAQSCSLCFSALLSSFRRLLCGICSRLDNDEPYGEVKMTKAQPGPMISRPQEESTENVDEERVPSSFSHSLQTVVENLKRLTAPREDKGWSHGEDCYNSELSDVDFEDDGEGDLDMEA 1268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01007 1268 MobiDBLite consensus disorder prediction 1233 1268 - -
Aip03g01007 1268 Gene3D - 350 434 IPR042197 -
Aip03g01007 1268 PRINTS Disease resistance protein signature 735 751 - -
Aip03g01007 1268 PRINTS Disease resistance protein signature 215 230 - -
Aip03g01007 1268 PRINTS Disease resistance protein signature 385 399 - -
Aip03g01007 1268 PRINTS Disease resistance protein signature 292 306 - -
Aip03g01007 1268 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 158 IPR035897 -
Aip03g01007 1268 Gene3D - 12 176 IPR035897 -
Aip03g01007 1268 ProSiteProfiles TIR domain profile. 14 180 IPR000157 GO:0007165
Aip03g01007 1268 SUPERFAMILY "Winged helix" DNA-binding domain 421 525 IPR036390 -
Aip03g01007 1268 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 1033 - -
Aip03g01007 1268 Gene3D Ribonuclease Inhibitor 719 902 IPR032675 -
Aip03g01007 1268 Gene3D Ribonuclease Inhibitor 537 718 IPR032675 -
Aip03g01007 1268 SUPERFAMILY L domain-like 539 880 - -
Aip03g01007 1268 MobiDBLite consensus disorder prediction 1188 1219 - -
Aip03g01007 1268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 444 IPR027417 -
Aip03g01007 1268 Pfam NB-ARC domain 195 433 IPR002182 GO:0043531
Aip03g01007 1268 Pfam TIR domain 15 182 IPR000157 GO:0007165
Aip03g01007 1268 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 1033 IPR044974 GO:0006952
Aip03g01007 1268 Gene3D - 177 345 IPR027417 -
Aip03g01007 1268 SMART till_3 15 155 IPR000157 GO:0007165
Aip03g01007 1268 MobiDBLite consensus disorder prediction 1250 1268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01007 Aip-Chr3 9658447 9663138 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01007 12 775 WRKY Transcription Factor Family AT4G12020 32.102 1.02e-94 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01007 - - aip:107611979 1461.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01007 03 9658447 9663138 Aip03g01007 03 9658447 9663138 ECH