Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01004 ATGGCTACTAATtacgatgtctttctgagttttaggggtgaagacacacgtcatggattcacaggtcatctctacgatgctctctgccgcaacggaatcaacaccttcatcgatgatgagaatctcagaacaggagaaacaattcgacctcaactccttcaatccattgaagcctcaaagatctccattattgttttctcaacaaactatgcatcttcaacatggtgccttgatgaactcgtccagatCCTGCGGTGTCACAGGGAAAGGAACCAGCTTGTGTTTCCAGTCTTCTACAAAATAGAGCCTTCACATGTACGGTATCAGAAGGAAACTTACAAGAAAGCCATGGATGCTCATGAAATCAAGTTTGGTTGTCACTCTCAGAAGGTGAAAGAATGGAAGGAAGCTTTGAACAAAACATCCAACAGGAAAGGATTTCATTTGAAACAAGGGTATGAATTCGAGTTTATTCAAAAAATTGTAAGCAAGGCATTGACTCATATACCTCCAAGACAATTACTTACTGAGGATCGTATGATTGGATTGCAAACTCGAGTTGTAGAAGTGAAGTCACATCTATATTCTTGGTACAGGGTATTATCCAATGGCGAATCACCCAAAAGAAAGCACTACAACAACAATACCATGTTGGGGATTGTTGGAATTGGTGGGAGTGGAAAGACGACGCTTGCCAAAGCCTTGTACAACTCCATCTGCTACCGGTTTGAATGTGTTTGTTTTCTTCTCAATGTTAGAAAAATTTCAGATCAAGAAGAGGGCCTAGTACGTCTACAGCAAACGCTCCTCTCAAAGTTGCTTGGGGAGTGGGAAATCAAGGTCCACAGTGTCGAGGAAGGAATCAGTATGATCAAAGAGAAACTTAGCAAAAAAAGAGCTCTTATTGTTCTTGATGATGTTGATAAGATAGAACAATTAAAAGCATTGGCAGGAGAATGTGACTGGTTTAGTGATACGACTCGAATTGTTATGACAACAAGGGATAAATATCTTCTAACAGCTCATAAAGTAGAAAAGATTTACAAGATGAAATTGCTAAGTGACCCTGAATCTCTAGAGCTCTTGTGTTGGAACGCCTTCAAAATGACAAGGCCCAAAGAAAACTATGAAGATCTATCCAATCAAGCAATACATTATGCCCAGGGCCTCCCATTAGCCTTAAAGGTTATAGGGTCTAATTTGATTAATAAAAATTTAGAAGAGTGGAAGTCTGCTTTGGACAAATATGAGAAGAATCCTCCTAAAGACATTCAAAGTGTTCTTAGAGTAAGCTATGATAGTCTTGAAGGCAATGAAAAGGATATTTTTCTTGACATAGCATGCTTCTTCAATGGGAAGAAATGGGAATATGTAAAAAATGTATTAGATGGATGTGGTATGTTTACAGAAGATGGTATTAGAATACTAGTTGATAAATCTCTCTTAACTATCAGCGATGGTTACTTGAGGATGCATGATCTAATACAGAATATGGGTAGAGAGATTGTGAAGCAGGAGGCACCAAGAGAAGTTAGTGACCGCAGCAGATTATGGTTTCATGAAGATGTTCTTGAACTACTACCCGATGATAAAGAAAATAAAAAAATTGAAGGAATAAAGCTTGTTCAATGTGAAGAACATGATTGGACTGACACTGCCTTTGAAAAGGTGAAGAAACTTAGAATTCTTATTCTTCGGAACACAAACCTTTCATGTCGGACTATTCCTCTACCTGAGCAATTAAGGCTGCTTGATTGGAAGGGGTACCCTTCAAATTCTATTCCGTCGAACTTAAAAAAAATTGTTGCCTTCAGTTTACGTCATAGTCCTCTCATGTTGGAAGAGCCGTTTCAGAACTTTAAGCATTTGACTTACATGAATTTCTCCCATTGTGAATCCATCACTCATTTTCCTAGCGTATCTGAAGCCCGAAGTTTAAGAAAATTGATACTCAATGGATGCAAAAACTTGGTTAGCTTTGATGAATCGGTTGGAGATCTCCCAAACCTTACATATTTGAGAGCTTCAAAGTGCACTAAGTTAAGAAAGTTTCCTTCAAGAATTTGTCTGCCTTCACTAGAGCACCTTTCCTTTAACTGGTGTAGAAGACTTGGACTCTTCCCGGACATAGTAGGAAAGATGGATAAGCCATTAAAGATTTGTTTGAAAGCTACTGTTATTCAAGAGCTTCCGGATTCCTTGGTTGATCTTGTAGGACTTCGCTATTTAGATTTGACAAGTTGCGAGAAACTTGGTTATCTTCCAAGCAGCTTATTTATGCTGCCAAATTTTGTCACATTGAAAGTTGGAGGATGCCCTCAACTTGGTGGATCATTTGCAAGATTCAGAGAAAGCCTTTCAACTACTGCAGAGTGCCGTCCAAGTTTAGAAACTCTGCATTTCAGCCATGCAAGTTTATGTGACGAAGATCTTCAAGTAATTATGCAGAGTTTTCCAAACTTGGAAGTCTTAAATGTTTCATCAAACAACTTTGTGTCTATTCCAGCATGCATTCAAGAATCGTCCTACTTGACAAGTTTGGATTTGAGTTGTTGCCTAAAGCTTCAAGAAATTCCAGAACTTCCCTCTAGTGTTAGGAAAGTGGATGTGAGACACTGCAATTCCTTAAGTGCAAACACAACAAGTATGCTATGGTCACAGGTGTCCAGAGAGATAAATAAATTACAAGTTGTGATGCCAACTTCCAATACAAAGATTCCAGAATGGTGGGACCATCGTACAAGTTGGAAGCGCGGTCGTCCACAGGACCTGAATTTCAAGGCACGTGGCAAGTTCCCAGTTGTGGCTTTGGCGTTTGTGTTTGGAGAAATGAACTATCAATCTGTTGGGCTGCACTTGTCCATTGAGTCTGGGGATGTAAACTCTGCATACCAACCATCGCATAATTTCACAGTTGCGGAAAATCATGTGTTGTTGTGCGACCTACGACTATGGTTCAGTGATGAGGAGTGGAAGAGACTTGATGCACATGTTGAGCATGGTAACACATGGAAGACAGTGGAGGTGAGGTGTGTACCAGACATCATCCCAGTTCATTGGGGAGTGTATGTTTACAAGAAAGAAACAAGCATGAAAGATATCCAATTTCAGGAGTCGGAATTCGTTGATGGTCTATATAGTGAACAGATATCCAATTGGAAGAAGAGTGCTGAGGAACTTGCCATTGCTAGCTTCTCAGAAAGCCTCAAAACTGTGGTAAAAAATTTGAAGCGGCTTATGGCTCCAAGAGAAGAAGAGCAAAGCATTTGCTTAATGCAACAGGATGAGGATGAGGATGAGGAAGGAGAGTCAGACATGGAAGCATAG 3327 0.3691 MATNYDVFLSFRGEDTRHGFTGHLYDALCRNGINTFIDDENLRTGETIRPQLLQSIEASKISIIVFSTNYASSTWCLDELVQILRCHRERNQLVFPVFYKIEPSHVRYQKETYKKAMDAHEIKFGCHSQKVKEWKEALNKTSNRKGFHLKQGYEFEFIQKIVSKALTHIPPRQLLTEDRMIGLQTRVVEVKSHLYSWYRVLSNGESPKRKHYNNNTMLGIVGIGGSGKTTLAKALYNSICYRFECVCFLLNVRKISDQEEGLVRLQQTLLSKLLGEWEIKVHSVEEGISMIKEKLSKKRALIVLDDVDKIEQLKALAGECDWFSDTTRIVMTTRDKYLLTAHKVEKIYKMKLLSDPESLELLCWNAFKMTRPKENYEDLSNQAIHYAQGLPLALKVIGSNLINKNLEEWKSALDKYEKNPPKDIQSVLRVSYDSLEGNEKDIFLDIACFFNGKKWEYVKNVLDGCGMFTEDGIRILVDKSLLTISDGYLRMHDLIQNMGREIVKQEAPREVSDRSRLWFHEDVLELLPDDKENKKIEGIKLVQCEEHDWTDTAFEKVKKLRILILRNTNLSCRTIPLPEQLRLLDWKGYPSNSIPSNLKKIVAFSLRHSPLMLEEPFQNFKHLTYMNFSHCESITHFPSVSEARSLRKLILNGCKNLVSFDESVGDLPNLTYLRASKCTKLRKFPSRICLPSLEHLSFNWCRRLGLFPDIVGKMDKPLKICLKATVIQELPDSLVDLVGLRYLDLTSCEKLGYLPSSLFMLPNFVTLKVGGCPQLGGSFARFRESLSTTAECRPSLETLHFSHASLCDEDLQVIMQSFPNLEVLNVSSNNFVSIPACIQESSYLTSLDLSCCLKLQEIPELPSSVRKVDVRHCNSLSANTTSMLWSQVSREINKLQVVMPTSNTKIPEWWDHRTSWKRGRPQDLNFKARGKFPVVALAFVFGEMNYQSVGLHLSIESGDVNSAYQPSHNFTVAENHVLLCDLRLWFSDEEWKRLDAHVEHGNTWKTVEVRCVPDIIPVHWGVYVYKKETSMKDIQFQESEFVDGLYSEQISNWKKSAEELAIASFSESLKTVVKNLKRLMAPREEEQSICLMQQDEDEDEEGESDMEA 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01004 1108 CDD AAA 220 335 - -
Aip03g01004 1108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 446 IPR027417 -
Aip03g01004 1108 MobiDBLite consensus disorder prediction 1091 1108 - -
Aip03g01004 1108 SUPERFAMILY "Winged helix" DNA-binding domain 423 527 IPR036390 -
Aip03g01004 1108 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 146 IPR035897 -
Aip03g01004 1108 Coils Coil 399 419 - -
Aip03g01004 1108 ProSiteProfiles TIR domain profile. 3 169 IPR000157 GO:0007165
Aip03g01004 1108 SUPERFAMILY L domain-like 539 886 - -
Aip03g01004 1108 Pfam TIR domain 4 165 IPR000157 GO:0007165
Aip03g01004 1108 Gene3D - 2 171 IPR035897 -
Aip03g01004 1108 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 897 IPR044974 GO:0006952
Aip03g01004 1108 SMART AAA_5 214 354 IPR003593 -
Aip03g01004 1108 MobiDBLite consensus disorder prediction 1087 1108 - -
Aip03g01004 1108 PRINTS Disease resistance protein signature 387 401 - -
Aip03g01004 1108 PRINTS Disease resistance protein signature 217 232 - -
Aip03g01004 1108 PRINTS Disease resistance protein signature 294 308 - -
Aip03g01004 1108 PRINTS Disease resistance protein signature 735 751 - -
Aip03g01004 1108 Pfam NB-ARC domain 215 435 IPR002182 GO:0043531
Aip03g01004 1108 Gene3D - 352 436 IPR042197 -
Aip03g01004 1108 Gene3D - 172 349 IPR027417 -
Aip03g01004 1108 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 4 897 - -
Aip03g01004 1108 SMART till_3 4 144 IPR000157 GO:0007165
Aip03g01004 1108 Gene3D Ribonuclease Inhibitor 532 720 IPR032675 -
Aip03g01004 1108 Gene3D Ribonuclease Inhibitor 721 898 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01004 Aip-Chr3 9629791 9639086 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01004 2 785 WRKY Transcription Factor Family AT4G12020 30.333 4.89e-84 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01004 - - ahf:112771910 1924.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01004 03 9629791 9639086 Aip03g01004 03 9629791 9639086 ECH