Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01003 ATGGATGCTCATGGAATCAGGTTTGGTTGTCACTCTCAGAAGGTGAAAGAATGGAAGGAAGCTTTGGACGAAACATCCAACATGAAAGGATTTCATTTGAAACAAGGGTATGAATTCAAGTTTATTCAAGAAATTGTGAAAAAGGCATTGACTCGTATACCTCCAAGAAAATTACTTATTGGGGATTATATGGTTGGAATGCAAACTCGAGTTGAAGAAGTGGAGTCAGATCTATATTCTTGGGACAGGGTATTATCCAATGGCGAATCACCCAAAAGAAAGCACTACAACAACAATACCATGTTGGGGATTGTTGGAATTGGTGGGAGTGGAAAGACGACGCTTGCCAAAGCCTTGTATAACTCCATCTGCGACCAGTTTGAATGTGCTTGTTTTCTTTTCAATGTTAGAAAAATTTTAGATCAAGAAGAGGGCCTAGTACGTCTACAGCAAACGCTCCTCTCAAAGTTGCTTGGGGAGTGGGAAATCAAGGTCCGCAGTGTTGAGGAAGGAATCAGTAAGATCAAAGAGAAACTTAGCAAAAAAAGAGCTCTTATTGTTCTTGATGATGTCGATAAGATAGAACAATTAAAAGCATTGGCAGGAGAATGTGATTGGTTTAGTTACGGGACTCGAATTGTTATAACAACAAGGGATAAATATCTTTTAGCAGCTCATGAAGTTGAAAAGATTTACGAGACGAAATTGTTAAGTGACCCTGAATCTCTAGAGCTCTTCTGTTGGAACGCCTTCAAAATGACAAGGCCCAAAGAAAACTATGAAGATCTATCCAATCAAGCAATACATTATGCCCAGGGCCTCCCATTAGCCTTAAAGGTTATAGGCTCTAATTTGATTAATAAAAATTTAGAAGAGTGGAAGTCTGCTTTGGACAAATATGAGAAGAATCCTCCTAAAGACATTCAAAGTGTTCTTAGAGTAAGCTATGATAGTCTTGAAGGCAATGAAAAGGATATTTGA 981 0.3843 MDAHGIRFGCHSQKVKEWKEALDETSNMKGFHLKQGYEFKFIQEIVKKALTRIPPRKLLIGDYMVGMQTRVEEVESDLYSWDRVLSNGESPKRKHYNNNTMLGIVGIGGSGKTTLAKALYNSICDQFECACFLFNVRKILDQEEGLVRLQQTLLSKLLGEWEIKVRSVEEGISKIKEKLSKKRALIVLDDVDKIEQLKALAGECDWFSYGTRIVITTRDKYLLAAHEVEKIYETKLLSDPESLELFCWNAFKMTRPKENYEDLSNQAIHYAQGLPLALKVIGSNLINKNLEEWKSALDKYEKNPPKDIQSVLRVSYDSLEGNEKDI 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01003 326 Pfam NB-ARC domain 99 319 IPR002182 GO:0043531
Aip03g01003 326 Gene3D - 236 320 IPR042197 -
Aip03g01003 326 PRINTS Disease resistance protein signature 101 116 - -
Aip03g01003 326 PRINTS Disease resistance protein signature 271 285 - -
Aip03g01003 326 PRINTS Disease resistance protein signature 178 192 - -
Aip03g01003 326 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 326 IPR044974 GO:0006952
Aip03g01003 326 SMART AAA_5 98 237 IPR003593 -
Aip03g01003 326 Gene3D - 2 55 IPR035897 -
Aip03g01003 326 Coils Coil 283 303 - -
Aip03g01003 326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 325 IPR027417 -
Aip03g01003 326 Gene3D - 56 232 IPR027417 -
Aip03g01003 326 PANTHER ARCHAEAL ATPASE 7 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01003 Aip-Chr3 9613137 9614616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01003 102 326 WRKY Transcription Factor Family AT5G45050 32.301 1.33e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01003 - - adu:107477189 596.275