Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01001 ATGGGTTTTCATTTAGCTGGTATCAGAAGAAAGCTATCATTTAATTCGAACCAAGCATCTTCAAAAGCTTTAGAAGTCCCAAAAGGCCATCTTGCTGTCTATGTTGGAGAGAATATGAAGCGGTTTCTGATTCCCGTTTCGTCTTTGAACCAGACTTCGTTTCAAGAATTACTAAGCCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGTCTCACTATTCCATGCAGTGAGGAAGCTTTCTTGGACCTCACTTCTTGCTTAATATAA 276 0.3949 MGFHLAGIRRKLSFNSNQASSKALEVPKGHLAVYVGENMKRFLIPVSSLNQTSFQELLSQAEEEFGYDHPMGGLTIPCSEEAFLDLTSCLI 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01001 91 Pfam Auxin responsive protein 9 90 IPR003676 GO:0009733
Aip03g01001 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Aip03g01001 91 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01001 Aip-Chr3 9597496 9597771 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01001 18 90 Calmodulin-binding Proteins AT3G43120 49.315 1.21e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01001 K14488 - aip:110269930 166.007