Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00998 ATGGCTTTCCGCATACCAGGTATTAGAAGAGCAACAAAGAGCAATGATGTCCCAAAAGGATATCTTGCAGTTTATGTTGGAGATAAAATGAGGAGGTTTGTAATTCCTGTATCATACTTGAACCAACCTTTGTTTCAAGAATTACTAAACCATACAGAAGAAGAATTCGGTTATGATCATCCGAATGGTGGTCTCACAATTCCATGCAGGGAGGATGAGTTCTTAAACCTCGCTTCTCAGTTGAGTAGGCTagagattgtGAAGCAGGAGGCACCAAGAGAAGTTAGTGACCGCAGCAGATTATGGTTTCATGAAGATGTTCTTGAACTACTACCCGATGATAAAGAAAATAAAAAAATTGAAGGAATAAAGCTTGTTCAATGTGAAGAACATGATTGGACTGACACTGCCCTTGAAAAGATGAAGAAACTTAGAATTCTCATTCTTCGGAACACAAACCTTTCATGTCGAACTATTCTTCTACCTGAGCAATTAAGGCTGCTTGATTGGAAGGGACAACTTGCCATTGCTAGCTTCTCAGAAAGCCTCAAAACTGTGGTAAAAAATTTGAAGCGGCTTATGGCTCCAAGAGAAGAAGAGCAAAGCATTTGCTTAATGCAACAGGATGAGGATGAAGATGAGGAAGGAGAGTCAGACATGGAAGCATAG 669 0.3961 MAFRIPGIRRATKSNDVPKGYLAVYVGDKMRRFVIPVSYLNQPLFQELLNHTEEEFGYDHPNGGLTIPCREDEFLNLASQLSRLEIVKQEAPREVSDRSRLWFHEDVLELLPDDKENKKIEGIKLVQCEEHDWTDTALEKMKKLRILILRNTNLSCRTILLPEQLRLLDWKGQLAIASFSESLKTVVKNLKRLMAPREEEQSICLMQQDEDEDEEGESDMEA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00998 222 PANTHER AUXIN-INDUCED PROTEIN 10A5 11 82 - -
Aip03g00998 222 Pfam Auxin responsive protein 11 78 IPR003676 GO:0009733
Aip03g00998 222 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 82 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00998 Aip-Chr3 9592046 9593879 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00998 16 74 Calmodulin-binding Proteins AT3G43120 59.322 1.04e-19 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00998 K14488 - ahf:112732589 248.44