Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00993 ATGGCTTTCCGCATTCCCGGTATTAGACGGGCCACATCATTTTCTGCATCAAAGGGAACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTGGGAGATAAGATGAAGAGGTTTGTGATTCCAGTATCATACTTGAATCAACCTTCATTCCAAGAATTACTATGCCAGGCCGAAGAGGAATTCGGATATGATCATCCAAATGGTGGTCTCACAATTCCATGCAGTGAGGATGAGTTCCAAAACCTTACTTCTGAATTCAGTGGACAGTAA 270 0.4222 MAFRIPGIRRATSFSASKGTNVPKGYLAVYVGDKMKRFVIPVSYLNQPSFQELLCQAEEEFGYDHPNGGLTIPCSEDEFQNLTSEFSGQ 89
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00993 89 Pfam Auxin responsive protein 16 83 IPR003676 GO:0009733
Aip03g00993 89 PANTHER AUXIN-INDUCED PROTEIN 10A5 5 87 - -
Aip03g00993 89 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 5 87 IPR003676 GO:0009733
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip03g00993 Aip-Chr3 9582767 9583036 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00993 21 82 Calmodulin-binding Proteins AT3G43120 54.839 3.64e-19 75.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00993 K14488 - gmx:100782363 143.665