Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00991 ATGGATGCTCATGAAATCAGGTTTGATTGTCATTCTCAGAAGGTGAAAGAATGGAAGGAAGCTTTGGCCGAAACATCCAACATGAAAGGCTTTCATTTGAAACAAGGAAGAGGGCCTAGTACGTCTACAGCAAAAGCTCCTCTCAGAGTTGCTTGGGGAGGGGAAAATCAAGGAGAATGTGATTGGTTTGATCAAGCAACTCAAATTATTATAACAACAAGGGATAAATATCTGCTAACAGCTCATAAAGTCGAACAGATTTCCGAGATGAAATTGCTAAGTGACCCTGAATCTCTAGAGCTCTTCTGTTGGAATGCCTTCAACATGGCGAGTCCCAAATCAAACTATGAAGACCTATCCAATCAAGCAATACATTATGCCAAGGGCCTTCCATTAGCCTTAAAAGTTATAGGCTCTAATTTGATTAATAAAAATTTAGAAGAGTGGAAGTCTGCTTTGGACAAATATGAGAAGAATCCTCATACAGATATTCAAAGTGTTCTTAGAGAAAATAGAAAAGTTGAAGGAATAAAGCTTAACCAATGTGAAGAAGATGATTGGACTGACACTGCCTTTGTGAAGATGAAGAAACTTAGAATTCTCATTTTTCGGAACACAAACTTTTCATGTGGGACTATTCTTCTACCTAAGCAACTAAGGTTGCTTGATTGGAAGGGGTACCCTTCAAATTCTATGCCGTCGAACTTAAAAGAAATCGCTGCCTTCAGTTTACGTCATAGTCCTCTCATGTTGGAAAAGCCGTTTCAGAGTTTTCCAAACTTGGAAGCCTTAAATGTTTCATTAAACAACTTTGTGTCTATTCCAGCATGCGTTCAAGAATCATCCTACTTAACAAGTTTGGATTTGGGTTACTGCCTAAATCTTCAAGAAATTCCAGAACTTCCCTCTAGTGTTAGGAAAGTGGATGTGAGACACTGCAATTCCTTAAGTGCAAACACAAGTATGCTATGGTCACAGGTGCACAAAGAGATAAATAAATTACAAGTTGTGATGCAAACTTCCAATACAGAGATTCCAGAATGGTGGGACTATCGTACAAGTTGGTTTAATCATCGGAATCCTGACATCTTATCTCAGCGGGATCCAGAGAGCAAAAAGCTATGGGCAAATATCGAACGGCATTACGGCTCGAGACCCATTAGCGTCGATCCGATCCAAACAATTATTCCAAAAGGTTCATCCTACCACACACCCAGTCCACAGCGCCCCTCATTCTCACTTGGGATAACGCATATCTTCAAAACACCCACACCGTCCCCTGACTCATTCATCCGTTACTTCGGGGACGGAAACCCACTGAGCGGGATGAACAACGAATCAGAAGGAAATGGCGTTGGTCCCAAAGAATCTGATTCACTTCCAAGACGGGCCAAATCCAGTGTACGTCAGATTGGGTGA 1419 0.4116 MDAHEIRFDCHSQKVKEWKEALAETSNMKGFHLKQGRGPSTSTAKAPLRVAWGGENQGECDWFDQATQIIITTRDKYLLTAHKVEQISEMKLLSDPESLELFCWNAFNMASPKSNYEDLSNQAIHYAKGLPLALKVIGSNLINKNLEEWKSALDKYEKNPHTDIQSVLRENRKVEGIKLNQCEEDDWTDTAFVKMKKLRILIFRNTNFSCGTILLPKQLRLLDWKGYPSNSMPSNLKEIAAFSLRHSPLMLEKPFQSFPNLEALNVSLNNFVSIPACVQESSYLTSLDLGYCLNLQEIPELPSSVRKVDVRHCNSLSANTSMLWSQVHKEINKLQVVMQTSNTEIPEWWDYRTSWFNHRNPDILSQRDPESKKLWANIERHYGSRPISVDPIQTIIPKGSSYHTPSPQRPSFSLGITHIFKTPTPSPDSFIRYFGDGNPLSGMNNESEGNGVGPKESDSLPRRAKSSVRQIG 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00991 472 PRINTS Disease resistance protein signature 279 295 - -
Aip03g00991 472 PRINTS Disease resistance protein signature 127 141 - -
Aip03g00991 472 SUPERFAMILY L domain-like 179 317 - -
Aip03g00991 472 PANTHER ARCHAEAL ATPASE 58 169 - -
Aip03g00991 472 PANTHER ARCHAEAL ATPASE 173 248 - -
Aip03g00991 472 PANTHER ARCHAEAL ATPASE 257 354 - -
Aip03g00991 472 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 58 169 IPR044974 GO:0006952
Aip03g00991 472 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 257 354 IPR044974 GO:0006952
Aip03g00991 472 MobiDBLite consensus disorder prediction 434 472 - -
Aip03g00991 472 Pfam NB-ARC domain 64 167 IPR002182 GO:0043531
Aip03g00991 472 Gene3D Ribonuclease Inhibitor 171 349 IPR032675 -
Aip03g00991 472 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 173 248 IPR044974 GO:0006952
Aip03g00991 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 169 IPR027417 -
Aip03g00991 472 Gene3D - 92 170 IPR042197 -
Aip03g00991 472 Coils Coil 139 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00991 Aip-Chr3 9564636 9568837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00991 58 144 WRKY Transcription Factor Family AT5G45050 39.326 3.69e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00991 - - ahf:112737088 218.779