Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00989 ATGTTGTCGGCAAGTTTGGAAGTTGTAGCATGTTTTCCAGCAACAGTAAGAGCTACACTGGTGAAGCAAAACAGTGGTGGCATTAGATCCTCTCCTCCGGCAGTGGCATTAGTAACTCCGACGAAAACAGGGAGGCCAGGGatCCTTCGGTGTCACAGGGAAAGGAACCAACTTGTGTTTCCGGTCTTCTACAAAGTAGAGCCCTCAGATGTACGGCATCGGAGGAACACTTACAAGGAAGCCATGGATGCTCATGAAATCAGGTTTGGTTGTCATTCTCAGAAGGTGAAAGAATGGAAGGAAGCTTTAGCTGAAACATCCAACAGGAAAGGCTTTCATTTGAAACAAGGGTATGAATTCAAGTTTATTCAAGAAATTGTAGGCAAGGCATTGACTCATATACCTCCAAGACAATTACTTATTGAGGATCATATGGTTGGATTGCAAACTCGAGTTGTAGAAGTGAAGTCACATCTATATTCTTGGCACAGGAGATTATCCAGTAGCGAATCACCCAAAACAAAGTTCTATAATAACAATACCATGTTGGGGATTGTTGGAATTGGTGGGAGTGGAAAGACGACGCTTGCCAAAGCCTTGTATAACTCCATCTGCGACCAGTTTGAATGTGCTTGTTTTCTTTTCAATATTAGAAAAATTTCAGATCAAGAAGAGGGCCTAGTACTTCTACAGAAAATGCTCCTCTCAGAATTGCTTGGGGAGGAGAAAATCAAGaatatgggtagggagattgtgaagcaggaggcaccaaaagaagttagtgaccgcagcagattatggTTTCATGAAGATGTTCTTGAGCTACTACCCGATGATAAAGAAAATAAAAGAATTGAAGGAATAAAGCTTGTTCAATGTGAAGAACATAATTGGACTGACAATGCCTTTGAAAAGATGAAGAAACTTAGAATTCTCATTCTTCGGAACACAAACCTTTCATGTCGGATTATTCCTCTACCCGAGCAATTAAGGCTGCTTGATTGGAAGGGGTACCCTTCAAATTCTATTCCGTCGAACTTAAAAAAAATTGTTGCCTTCAGTTTACGTCATAGTCCTCTCATGTTGGAAAAGCCGTTTCAGAACTTTAAGCATTTGACTTACATGAATTTCTCCCATTGTGAATCCATCACTCATTTTCCTAATGTATCTGAAGCCCAAAGTTTAAGAAAATTGATACTCAATGGATGCATAAACTTGGTTAGGTTTGATGAATCAGTTGGATTTCTCCCAAACCTTACATATTTGAGAGCTTCAAAGTGCACTAAATTAAGAAAGTTTCTTTCAAGAATTTGTCTGCCTTCACTAGAGCACCTTTCCCTTAACTGGTGTAGAAGACTTGGACTCTTCCCAGACATAGTGGGAAAGATGGATAAGCCATTAAAGATTTGTTTGAAAGCTACCGCTATTCAAGAGCTTCCAGATTCCTTTGTTGATCTTGTAGGACTTCTCTATTTAGATTTGACAAGTTGCGAGAAACTTGGTTATCTTCCAAGCAGCTTATTTATGCTGCCAAATTTTGTCACACTGAAAGTTGGAGGATGCCCTCAACTTGGTGGATCATTTGCAAGATTCAGAGAAAGCCTTTCAACTACTGCAGAGAGCTGTCCAAGTTTAAAAACTCTGCATTTAAGCCATGCAAGTTTATGTGACGAAGATCTTCATGTAATTATGCAGAGTTTTCCAAACTTGGAAGTCTTAAATGTTTCATCAAACAACTTTGTATCTATTCCAGCATGCGTTCAAGAATCGTCCTACTTGACAAGTTTGGATTTGAGTTACTGCCTAAATCTTCAAGAAATTCCAGAACTTCCCTCTAGTGTTAGGAAAGTGGATGTGAGACACTGCAGTTCCTTAAGTGCAAACACAACAAATATGCTATGGGCACAGGTGCGCAAAGAGATACATAAATTACAAGTTGTGATGCCAACTTCCAATACTGAGATTCCAGAATGGTGGGACTATCATGGAAGTTGGCAGGGCTATCCACAGTACCTGAATTTCGAGGTACGTGGCAAGTTCCCTGTTGTGGCTTTGGCGTTTGTGTTTGGAGAAATGAACTATCAACCTGTTGGTCTGCACTTGTCCATTGACTCTAGAGATTACTCTGCATACCAACCATCGCATAATTTCACAGTTGCCGAAAATCATGTGTTGTTGTGTGACCTACGAGTATTGTTCAGTGATGAGGGGTGGAAGAGACTTGATGCACATGCTGAGCATGGTAACAAATGGAAAACAGTGAAGGTGAAGTGTGTACCAGACATCATCCCAGTTCAATGGGGAGTGTATGTTTACAAGGAAGAAACAAGCATGAAAGGTATCCGCTTTAGTGGGTCGCAACAATTCGGGTTGGAGAGTGTACCTCGTAGTCCAGGGAGTTTGACGAAGAAGAGATTATCTTCTGCTGAGGAACTTGCCATCATTGCTAGCTTCGCAGAAAGCCTCCAAAATGTGGTAGAAAAGTTGAAGAGGCTTATGGCTCCAATAGAAGAAGACCAATGCTTGAGCTTAATGCAACAAGACGGAGATGAGGAGGACGAAAATGAGGATGAAGGAGAGGAAGGGGAGTCAGACATCGAAGCTTAG 2607 0.4001 MLSASLEVVACFPATVRATLVKQNSGGIRSSPPAVALVTPTKTGRPGILRCHRERNQLVFPVFYKVEPSDVRHRRNTYKEAMDAHEIRFGCHSQKVKEWKEALAETSNRKGFHLKQGYEFKFIQEIVGKALTHIPPRQLLIEDHMVGLQTRVVEVKSHLYSWHRRLSSSESPKTKFYNNNTMLGIVGIGGSGKTTLAKALYNSICDQFECACFLFNIRKISDQEEGLVLLQKMLLSELLGEEKIKNMGREIVKQEAPKEVSDRSRLWFHEDVLELLPDDKENKRIEGIKLVQCEEHNWTDNAFEKMKKLRILILRNTNLSCRIIPLPEQLRLLDWKGYPSNSIPSNLKKIVAFSLRHSPLMLEKPFQNFKHLTYMNFSHCESITHFPNVSEAQSLRKLILNGCINLVRFDESVGFLPNLTYLRASKCTKLRKFLSRICLPSLEHLSLNWCRRLGLFPDIVGKMDKPLKICLKATAIQELPDSFVDLVGLLYLDLTSCEKLGYLPSSLFMLPNFVTLKVGGCPQLGGSFARFRESLSTTAESCPSLKTLHLSHASLCDEDLHVIMQSFPNLEVLNVSSNNFVSIPACVQESSYLTSLDLSYCLNLQEIPELPSSVRKVDVRHCSSLSANTTNMLWAQVRKEIHKLQVVMPTSNTEIPEWWDYHGSWQGYPQYLNFEVRGKFPVVALAFVFGEMNYQPVGLHLSIDSRDYSAYQPSHNFTVAENHVLLCDLRVLFSDEGWKRLDAHAEHGNKWKTVKVKCVPDIIPVQWGVYVYKEETSMKGIRFSGSQQFGLESVPRSPGSLTKKRLSSAEELAIIASFAESLQNVVEKLKRLMAPIEEDQCLSLMQQDGDEEDENEDEGEEGESDIEA 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00989 868 MobiDBLite consensus disorder prediction 840 868 - -
Aip03g00989 868 Gene3D - 138 314 IPR027417 -
Aip03g00989 868 Gene3D Ribonuclease Inhibitor 351 457 IPR032675 -
Aip03g00989 868 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 52 242 - -
Aip03g00989 868 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 244 785 - -
Aip03g00989 868 MobiDBLite consensus disorder prediction 844 868 - -
Aip03g00989 868 Gene3D Ribonuclease Inhibitor 458 646 IPR032675 -
Aip03g00989 868 Gene3D - 46 137 IPR035897 -
Aip03g00989 868 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 52 242 IPR044974 GO:0006952
Aip03g00989 868 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 244 785 IPR044974 GO:0006952
Aip03g00989 868 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 248 IPR027417 -
Aip03g00989 868 SUPERFAMILY L domain-like 286 631 - -
Aip03g00989 868 PRINTS Disease resistance protein signature 484 500 - -
Aip03g00989 868 PRINTS Disease resistance protein signature 182 197 - -
Aip03g00989 868 SUPERFAMILY Toll/Interleukin receptor TIR domain 48 111 IPR035897 -
Aip03g00989 868 Pfam TIR domain 48 128 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00989 Aip-Chr3 9538795 9548024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00989 244 534 WRKY Transcription Factor Family AT4G12020 33.119 6.65e-29 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00989 - - ahf:112771910 1185.24