Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00988 ATGCATATGGCCATGTTGCAATATAATGAGTTGACAAGATCTGTCAGTGTTGGAGTGCACATAGTGATGGCAAATCCAGGTGGAGAAATAGAAACTGGTTCTGAGACCATCAGCAACAGCAGCAGCAGTTACGATGTTTTTCTGAGTTTTAGGGGTGAAGACACGCGTTACGCCTTCACCGGTCATCTCTACTATGCCTTGTGCCGCAAGGGAATCAAAACCTTCATGGATAGCGAGGATCTGAGGGTGGGAGAAACGACTCGACCTCAACTCTTTCGGGCCATTGAAGAATCCAAGGTTTCAATCATTATTTTCTCCGAGAACTATGCAGATTCCACTTGGTGTCTTGATGAACTTGCCAAGATCCTCGAGTGTCAGGAGGAAAAGGGCCAGCTTGTGTTTCCCATATTCTACAAAATAGAGCCTTCAGATGTACGGCATCAGAGAAACAGTTATAGGCTTGCCATGGCTGCTCATGAAAATAAGTTTGGTTGTTACTCTGAGAAGGTGCAGAAGTGGAAGTCAGCCTTGCTTGGAGTATCTAACATAACAGGATATCATTTACAAGAAGGGTTCGAATTCAAGTTCATTCAAGATATTGTTTGCAAGGCCGCCACAAAAATTTCTCCTAAACAGATACCTGTGGAGGAGAGTGTAGTTGGACTGCAGTTTCGAGTTGCAGAACTGAAGTCACTCTTAGATATTGAGTCTAACAAGAACACTTTCATTTTGGGGATCATCGGAACTGGTGGAATTGGCAAAACAACACTCGCTAAGGTTTTCTATAACTCCATTTGCAATGAATATGAGGGTGCTTGTTTTATTTCCAATGTCAGAAAAGCTTCCAACCAAGACAAGGGGAGAATATTCCTGCAACAAAAGATCCTGTCAGATGCTCTTGGGGTGCAAAAGATCAAGTTGGACAGTGTTGAAAAAGGAATACATACAATAAAAGCCAATCTCAGCGCAaaaaaagttctcatagttctagatgatgttgataagatagaacagttgaaagaattagcaggaggatgtgactggtttggtcttgggagcagaatcattgtaacaacaagagataaacatttgctggtatctcaccagatcagaaggatttatgaaatggaaatgatgaacgatcgagaatcacttgagttgttttgtcagaatgccttcaagatgagtactcctgctagaaactatgaagacttgtcgaatcgagcaatacgttatggaaaaggtcttccattagctttaaaagtcataggctcagaattgattggtaaagatctgcaagtgtgggagtcttctttggacaaatatgagaagaatcctcatggagatatccaaaatattcttagaataagttatgacagtcttgaacgcaatgaaaaggaaattttccttgacattgcatgttttttcaatgggcagagattgaaatatgttaaaagaatactagatggctgtgacttttacacagacagtggtattaaaatactagttgataaatctctcataaccattgaaaatggttacttgaggatgcatgatctaacacaagacatgggtagagagattgtgaagcaagaagcaccaaaagagtctggtgaacgcagtaggttatggCTTTGTAAAGATGTTCTTGAAGTACTAACTGAAAATAGGGGAAATAGTAAAACTGAAGGAATGAAACTAGATTACTATGGAGAAGTCAACTGCTGTGATGATACCTTGGAGAAAATGATGAAACTTAGAGTTCTCATTGTTCACAATGCAAGCTTCTCCTCAAAGGGTATTCGTCTTCCCAATACATTAAGACTTGTTGATTGGAAAGGGTACCCTTCAACATCTTTTCCACCAGCAGGATTTAATCCCAGTAAAATTGCTGCCTTCAATTTAACTTGTAGTTCTCTTGTATTAAAGAAGCCATTTCAGAAATTTGATCAATTGACTTACATGAACTTCTCCTATTGCCAGTCCATCACTCAATTTCCTAGTGTGTTTGGATCCCCAAATTTAAGAGATTTGGTACTTGACGGATGCAAGCAATTAGTTAAGATTCATAATTCAGTTGGATTTCTCTCTAAACTTGTTTATTTGAGTGCTTCAGACTGCACTCAACTAAGGAGTTTTCTACCAGAAATCTTTCTACCATCTCTTGAATATCTTTCTTTTGACTCGTGTAAAAGACTAACACATTTGCCAAGGGTGAGAGAAAACATGGATAAACTATTAAAGATTTCTGTAAAACATACTGCTATTAGAGAGCTTCCGCTATCTTTTGCTAGCAGTCTTTGTGGGCTCGAATATTTAGACATGACAAATTGTAAGCAACTACAATGTGTATTTACAGGATGGTTTCCAAAGCTTCGAATATTGAAGATTGGAGGGTGTTCTCAACTTTGGAAATCATTAAATGTAGATACATTTTTTCTTCTAGAATATCGTTTGATGAGTTTGCATCTTAGCAATGCAAGTCTATCAGATGATGACCTTGAGAAAATTATGCAGATGTTTCCCTATTTAAAAGACTTAATTGTGTCCTCAAACTGCTTTGAGAAAATCCCGTTTAAACACTCCTTTTTCTGGACAAGTCTTGATGTTAGTTACTGTCTAAGCCTTAAATATGTTTTAGCACTTCCTTCTAGCATTCAAAAAGTAGATGCAAGACACTGCAATTCCTTAAGGACATACTCATCATCCACGCTATGGTCACAGATGCGCAAAGAGATAAAAGGATTGCAAATTGTGATGCCGAAGACACAACTTCCAAAATGGTTAGACTATTGTGACTCTGGAGGGATCCCCTTCTTATGGGCACGTGGCAGGTTCCCTGTAATGGCTCTAGTGTTGGAGTTTGGCAAAATGGACTACCAAGATATTAGTCTGCATTTGTTCATTGACGATGAGCATATATACAGCCAGCGCCCTCAAAGGCATAGTTTTGCTCTTGCAGAGGATCATGTGCTCTTGTGTGACCTGCGACTACTATTCAGTGATGAGGAGTGGAAGAGGCTTGATGTGCGTCTTGGACATGATAATGATTGGAAGGCAGTGCAGGTGAAGTGTGAAGCAGGCTTGAACTTAAGACAGTGGGGAGTTTATGTGTACAAGAATGAAACAAACATGGATGATATACAATTCCCGTGTCCTTATTATCATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTCATTCCTGGAGGCTGTGACAACACCACCAAGTGATGAGATGGAGGAAGAAACTCTAGCGGCAGTCTCAAGTAGAAAGGAAGAATGGTCATCCCCTGAATTATCTGATGATGATTCAAATCATGATAATCGTTCCCCTGGAACTTGTAGCCTTCGTTGTTCGGCATTATTGTTAAGCTTCAAGAAGCGACTTTGCTGTTGTAAGGTGAGAAGGAGGAGAACTACTTCATGGTGGATAGTTTTATGGAATCAATGGAGACGGAGGCAGAAGAGGCTAAGGGAAGAGGAGAGAAACTGGGAAGAAGAGAGAAAAATGGAGAGAGACATGAGACGGCAGAAGGAGATGGCAAATGAAGCAATGCAGAGAGATATGGAAGAGTTGTTGGAGAACATAATGGTGGAGGAGGACCAGCTGAAGAAAGAGAGATCAGAGACGTGTGGAAGTCAGAGAGAGGGGAGAGAAAAGGGACAGATTGAAGAGAGAAAGAGGTGGAGGGAAAGAAGGCAGACAATAGAAGAGACATGGATAGAGGAAAGGCAGCAGAAGGCAGAGAAAGAGACATGTTTGAGTCAAAGAGACGATATAAAAATGGAAGAGGTTGAAGAGGTAGAGGACGTAGAGGAGGACAAGAGCAAGAGGTGGAGGGAGGGAAAACAAAAGATGGAAGAGACGTGGATAGAGGAAAGACAGCAGAAGGAAGTGGTTGAAGAGACGTGGATGGGGGAATTTGATTGGAGTGTGATGAAGATGGAGGTTGAAACGAAAAGAAGACGAGAGAAGATGAGAGAAAAGGAAGAAGAATGGAGGGAAAAGCAGTTGGATGTGACAAGTGCGATCTCTTCACATCATGCTCCTTTCTCACCAAACCTCCAAATTGTGGTGGAAAATTTGAAGAGGCTTATAACTGTCGGAGAAGACAGTGGCTTCGACAATAACCACCATTATAGCTCGGAGTGGTTTCCGGAGAGGACAATATTAAGCCATCATGATGGGGAAGTGTGA 4200 0.3486 MHMAMLQYNELTRSVSVGVHIVMANPGGEIETGSETISNSSSSYDVFLSFRGEDTRYAFTGHLYYALCRKGIKTFMDSEDLRVGETTRPQLFRAIEESKVSIIIFSENYADSTWCLDELAKILECQEEKGQLVFPIFYKIEPSDVRHQRNSYRLAMAAHENKFGCYSEKVQKWKSALLGVSNITGYHLQEGFEFKFIQDIVCKAATKISPKQIPVEESVVGLQFRVAELKSLLDIESNKNTFILGIIGTGGIGKTTLAKVFYNSICNEYEGACFISNVRKASNQDKGRIFLQQKILSDALGVQKIKLDSVEKGIHTIKANLSAKKVLIVLDDVDKIEQLKELAGGCDWFGLGSRIIVTTRDKHLLVSHQIRRIYEMEMMNDRESLELFCQNAFKMSTPARNYEDLSNRAIRYGKGLPLALKVIGSELIGKDLQVWESSLDKYEKNPHGDIQNILRISYDSLERNEKEIFLDIACFFNGQRLKYVKRILDGCDFYTDSGIKILVDKSLITIENGYLRMHDLTQDMGREIVKQEAPKESGERSRLWLCKDVLEVLTENRGNSKTEGMKLDYYGEVNCCDDTLEKMMKLRVLIVHNASFSSKGIRLPNTLRLVDWKGYPSTSFPPAGFNPSKIAAFNLTCSSLVLKKPFQKFDQLTYMNFSYCQSITQFPSVFGSPNLRDLVLDGCKQLVKIHNSVGFLSKLVYLSASDCTQLRSFLPEIFLPSLEYLSFDSCKRLTHLPRVRENMDKLLKISVKHTAIRELPLSFASSLCGLEYLDMTNCKQLQCVFTGWFPKLRILKIGGCSQLWKSLNVDTFFLLEYRLMSLHLSNASLSDDDLEKIMQMFPYLKDLIVSSNCFEKIPFKHSFFWTSLDVSYCLSLKYVLALPSSIQKVDARHCNSLRTYSSSTLWSQMRKEIKGLQIVMPKTQLPKWLDYCDSGGIPFLWARGRFPVMALVLEFGKMDYQDISLHLFIDDEHIYSQRPQRHSFALAEDHVLLCDLRLLFSDEEWKRLDVRLGHDNDWKAVQVKCEAGLNLRQWGVYVYKNETNMDDIQFPCPYYHEEEEEEEEEESFLEAVTTPPSDEMEEETLAAVSSRKEEWSSPELSDDDSNHDNRSPGTCSLRCSALLLSFKKRLCCCKVRRRRTTSWWIVLWNQWRRRQKRLREEERNWEEERKMERDMRRQKEMANEAMQRDMEELLENIMVEEDQLKKERSETCGSQREGREKGQIEERKRWRERRQTIEETWIEERQQKAEKETCLSQRDDIKMEEVEEVEDVEEDKSKRWREGKQKMEETWIEERQQKEVVEETWMGEFDWSVMKMEVETKRRREKMREKEEEWREKQLDVTSAISSHHAPFSPNLQIVVENLKRLITVGEDSGFDNNHHYSSEWFPERTILSHHDGEV 1399
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00988 1399 MobiDBLite consensus disorder prediction 1084 1109 - -
Aip03g00988 1399 Gene3D - 42 205 IPR035897 -
Aip03g00988 1399 Gene3D Ribonuclease Inhibitor 572 745 IPR032675 -
Aip03g00988 1399 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 42 947 IPR044974 GO:0006952
Aip03g00988 1399 SMART till_3 43 183 IPR000157 GO:0007165
Aip03g00988 1399 Gene3D Ribonuclease Inhibitor 746 918 IPR032675 -
Aip03g00988 1399 SUPERFAMILY "Winged helix" DNA-binding domain 449 553 IPR036390 -
Aip03g00988 1399 ProSiteProfiles TIR domain profile. 42 208 IPR000157 GO:0007165
Aip03g00988 1399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 213 472 IPR027417 -
Aip03g00988 1399 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 42 947 - -
Aip03g00988 1399 MobiDBLite consensus disorder prediction 1063 1111 - -
Aip03g00988 1399 Pfam TIR domain 44 188 IPR000157 GO:0007165
Aip03g00988 1399 SUPERFAMILY Toll/Interleukin receptor TIR domain 34 186 IPR035897 -
Aip03g00988 1399 SUPERFAMILY L domain-like 569 906 - -
Aip03g00988 1399 Coils Coil 1148 1210 - -
Aip03g00988 1399 Gene3D - 206 373 IPR027417 -
Aip03g00988 1399 PRINTS Disease resistance protein signature 243 258 - -
Aip03g00988 1399 PRINTS Disease resistance protein signature 413 427 - -
Aip03g00988 1399 PRINTS Disease resistance protein signature 765 781 - -
Aip03g00988 1399 PRINTS Disease resistance protein signature 320 334 - -
Aip03g00988 1399 Coils Coil 1313 1337 - -
Aip03g00988 1399 Gene3D - 378 462 IPR042197 -
Aip03g00988 1399 Pfam NB-ARC domain 226 461 IPR002182 GO:0043531
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip03g00988 Aip-Chr3 9532283 9538758 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00988 39 803 WRKY Transcription Factor Family AT4G12020 30.506 1.03e-85 307
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00988 - - ahf:112771910 2584.29
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00988 03 9532283 9538758 Aip03g00988 03 9532283 9538758 ECH