Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00985 ATGAACTTTTATGCATGGATGGCTTTTGTGCCTCTTTGGCTCACTTTCTCATACACCTTCACTGCATTCAGTATATGGAGTCCAAATGGGTTCTTGTTCAAGCTTGGGATAATTGATTACTCTGGTGGATATGTTATTCATTTGTCTTCTGGGGTTGCTGGATTCACTGCTGCTTATTGGGTTGGACCACGTCTTAACAAGGATAGAGAAAGGTTTCCTCCAAACAACATCCTACTGATGTTGGCTGGGGCTGGTTTACTCTGGATGGGGTGGACCGGCTTCAATGGCGGCGACCCCTACTCAGTAGGCCTGGATTCCTCCCTGGCCGTGTTGAACACTCATGCTTGCACTGCCACCAGCTTGCTCACTTGGGTCATTCTTGATATCATCTTCTTCCGCAAACCCTCCGTCATTGGTGCTGTTCAAGGCATGATCACCGGCTTGGTCTGCATTACCCCTGCCGCAGGAGTTGTGCAAGGATGGGCAGCAATTCTAATGGGGATGCTATCAGGCTCAATTCCGTGGTTCACAATGATGGTAGTTCACAAGAGATCAAAGCTTCTCCAAAAGGTGGATGACACAATGGCAGTGTTGCACACTCATGCCATTGCAGGAACCCTTGGAGGAGTCCTTTCAGGCCTATTTGCTGTGCCAAAGCTCAACTTCTTGTTCTATGGTTCTTACAACAAATATGTTGGACTCTTCTATGGCCTCAAAATGGGAATGAGCAAAACAGGGTTTAGACAAATATGGATCCAGTTAGTTGGGATTTTCTTTGTGGTGACATTGAATGTGATTAGCACAAGCTTGATATGCCTCTTCATTAGGATGTTTATTCCTCTGAGGATGTCTGAGGAAGACATGGAGATTGGTGATGAAGCTGCTCATGGTGAAGAGGCTTATGCTATATGGGGTCAAGGTGATAAGCTTGAGAATGCAAGCTCTAAGTATGCAAGTTCAATGTATGATGATGTTGAAGGAGCCACCAATAAGAAAAAGCGTAGTGGCCAAGTTGAGATGATGTAG 1026 0.4571 MNFYAWMAFVPLWLTFSYTFTAFSIWSPNGFLFKLGIIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYSVGLDSSLAVLNTHACTATSLLTWVILDIIFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAAILMGMLSGSIPWFTMMVVHKRSKLLQKVDDTMAVLHTHAIAGTLGGVLSGLFAVPKLNFLFYGSYNKYVGLFYGLKMGMSKTGFRQIWIQLVGIFFVVTLNVISTSLICLFIRMFIPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKLENASSKYASSMYDDVEGATNKKKRSGQVEMM 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00985 341 Pfam Ammonium Transporter Family 1 301 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aip03g00985 341 ProSitePatterns Ammonium transporters signature. 39 64 IPR018047 GO:0008519|GO:0016020|GO:0072488
Aip03g00985 341 PANTHER AMMONIUM TRANSPORTER MEP2 1 341 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aip03g00985 341 SUPERFAMILY Ammonium transporter 1 283 - -
Aip03g00985 341 Gene3D Ammonium transporter AmtB like domains 1 305 IPR029020 -
Aip03g00985 341 PANTHER AMMONIUM TRANSPORTER 1 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00985 Aip-Chr3 9505330 9507209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00985 1 328 Inorganic Solute Cotransporters AT2G38290 61.280 2.82e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00985 K03320 - gmx:100787856 594.734