Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00984 ATGTACTTGAGGAGAATACAGTGTAGGGACCGGAGATGGGCTTTCGTATTGCAGCCATCAAAATACTCTTTTAGTCCAAGATTCTCAGATCATGCAAACTTGCAATCTTTTTCCTCCAAGACCACTGTGAGAGCATATGCTTCTCATGGTAGTTTCTTGAGAAGACATCTTTTAGGTTCAGATTCATATAGCTTTGCTTCATATAGAAATAATTGTATTGGTCTGGACAAAAGGACTAGTTTATGTATAAGTACTCAGTTACGTGCATATAGTTCTGAAAGTGATGGAAGAAATGCAAGTGAGGATAAGCATGTGCACGTTAAAGATGGAGCTAACATTGATAAAGGGAAAAATCAGAAAGAGAAGTTTGACAAAGATGTCAAGTATTGCAATGAGCATGCACGACTTGGCGAGCAGGATCAAGCGGAATGGCTTCATAATGAGAAACTTGGAATAGAAAGTAAGAAGAAAGAATCACCATTTTTGACAAGAAGGGATAAGTTCAGAAATGAGTTTCTAAGAAGAATTGTTCCTTGGGAGAAAATAAACATTTCATGGGACACATTTCCTTATCATGTCAATGAGCACACCAAGAATCTACTGGTGGAATGTACTGCTTCACATTTGAGACATAATTCATTCGCTTCATCTTTTGGTGTTCGTCTCACATCTTCAAGTGGGAGGATATTGCTTCAGAGTGTTCCTGGCACTGAACTCTATCGTGAGAGGCTAGTTAAAGCTCTTGCACATGATTTACAAGTTCCATTATTAGTTCTTGATAGTAGCATCCTTGCTCCTTATGACATTGATGATGAATTATCATCAGACTATGAGTCTGAAGATGATAATGCAGACTCCGGGGCAGAGGGCTCTTTGGAGTCAGAGAATGAGGATGATAATGATGCTGGCAATGAAGAAGAGTGGACTAGCAGTAATGAAGTGAAGTCAGATGCAAGTGAAAATGAAAATGATAATGATGATGCAATAGCATCGGCTGAGGCTGCTCTTAAGAAGGTTAAAGCAGCTGTTCAGAAACTTGTTCCTTACAACATTGAAGAATTTGAAAAGATATCATCTGGAGAATCTGAGAGTTCTGAGTCATCTAGGTCTAATGAAGCCAATTCTTCTGGTAAATCTGGGTGCCAGATAAGAAAAGGTGACCGAGTGAAGTACATTGGACCATCTACTCGAGCTACAATTGATGATAGGATCAGATTGGGGAAGATACTGACATCTGATGGGTCAACTAGTGCTTATACTGTTATACATGGCAGGCCTTTAACCACTGGTCAGAGAGGAGAGGTATATGAAGTAAGCGGAGATCAAGTTGCTGTCATAATGGATATTAATGAAGATCGTGGCAATGAGGGTGGGGCAGAGAATCTTAGTAGTGACCATCATACAAAACCACCGATTCGTTGGCTACATGGATTTAATAATAAATTTATTTTATGGGACATTGAGAATGATCTTGATGCTCAAGCACTAGATTGCTATATAGCACTGGAGGCTTTATGTGAGGTTTTGCATTCGAAACAACCGCTCATTGTCTACTTTCCAGATGGTTCACAGTGGTTGCATAAATCAGTTCCTAAGTCAAACCGTAATGAGTTTTTTAACAAGGTTGAAGAGCTGTTTGACCGGTTATCTGGCCCCGTTGTGTTGATCTGTGGGCAAAACAAAGTTCAATCAGGATCAAAGGAGAAAGAACAATTTACAATGATACTTCCAAACTTTGGACGAGTTGCTAAGCTGCCTCTTTCTCTGAAGCGTTTGACTGAGGGATTCAGAGGTGCAAAGAGATCAGAAGATGATGAAATTCACAAGCTCTTTTCTAATGTTTTGTGCGTACACCCACCTAAGGATGAAAATGTGCTGGTAACATTTAAGAAACAACTTGAAGAAGACAGGAAAATTGTCGTTTCAAGAAGTAATTTGAATGAATTAAGGAAGGTTCTCGAAGAACATCAGCTGTCATGTGTGGATCTATTGCATGTAAACACTGATGGTGTTATTTTGACAAAGCAAAAAGCTGAAAAAGTTATTGGGTGGTCGAAAAACCATTACTTATCTTCATGTCTGCTCCCTTCTGTGAAAGGAGAACGGTTGTGCATCCCTCGTGAAAGTCTTGAGATTGCAATCTCAAGGTTGAAGGGCCAGGAAAATATATCACAGAAGCCTTCCCAAAACCTTAAGAACCTTGCGAAGGATGAGTTTGAGAGCAATTTCATTTCAGCTGTGGTACCCCCTGGTGAAATTGGGGTGAAGTTTGATGATATAGGTGCTCTTGAAAACGTGAAGAAGGCACTTAATGAACTTGTTATTCTTCCGATGAGAAGACCAGAACTCTTCTCTCGTGGTAACTTGTTGCGGCCTTGCAAAGGAATATTACTTTTTGGTCCTCCTGGAACTGGAAAAACACTTCTGGCCAAAGCACTTGCAACTGAAGCTGGTGCAAATTTTATTAGCATAACTGGTTCAACTCTTACTTCAAAGTGGTTTGGAGATGCAGAAAAACTAACAAAAGCTCTTTTCTCCTTTGCTAGCAAGCTTTCTCCTGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTTGGTGCTCGTGGTGGTGCTTTTGAGCATGAAGCCACTAGGAGGATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGATCAAAAGAAAATCAAAGAATCCTCATTCTTGGTGCAACAAACCGGCCATTTGACCTTGACGATGCTGTCATTCGTCGCTTACCAAGAAGGATATATGTTGATTTACCTGATGCCGAAAATCGAATGAAGATTTTGAGAATATTTCTTGCACAAGAGAATTTGGATCCTAATTTTGAGTATGACAAACTTGCTAACTTGACTGAAGGATACTCTGGCAGTGATTTGAAGAACCTTTGTGTTGCTGCAGCATACAGACCTGTTCAAGAGCTCATAGAGGAAGAAAACATTGCACAGGGAGGGACTAATAGTACAACTACAGTATTAAGGCCTCTTAATTTGGATGATTTTATTCAGTCAAAATCCAAGGTGGGTCCGTCGGTGGCATACGATGCAACAAGTATGAATGAGCTGAGGAAGTGGAATGAAATGTATGGTGAAGGTGGTAGTAGGACTAAAGCATCATTCGGATTTTGA 3150 0.4003 MYLRRIQCRDRRWAFVLQPSKYSFSPRFSDHANLQSFSSKTTVRAYASHGSFLRRHLLGSDSYSFASYRNNCIGLDKRTSLCISTQLRAYSSESDGRNASEDKHVHVKDGANIDKGKNQKEKFDKDVKYCNEHARLGEQDQAEWLHNEKLGIESKKKESPFLTRRDKFRNEFLRRIVPWEKINISWDTFPYHVNEHTKNLLVECTASHLRHNSFASSFGVRLTSSSGRILLQSVPGTELYRERLVKALAHDLQVPLLVLDSSILAPYDIDDELSSDYESEDDNADSGAEGSLESENEDDNDAGNEEEWTSSNEVKSDASENENDNDDAIASAEAALKKVKAAVQKLVPYNIEEFEKISSGESESSESSRSNEANSSGKSGCQIRKGDRVKYIGPSTRATIDDRIRLGKILTSDGSTSAYTVIHGRPLTTGQRGEVYEVSGDQVAVIMDINEDRGNEGGAENLSSDHHTKPPIRWLHGFNNKFILWDIENDLDAQALDCYIALEALCEVLHSKQPLIVYFPDGSQWLHKSVPKSNRNEFFNKVEELFDRLSGPVVLICGQNKVQSGSKEKEQFTMILPNFGRVAKLPLSLKRLTEGFRGAKRSEDDEIHKLFSNVLCVHPPKDENVLVTFKKQLEEDRKIVVSRSNLNELRKVLEEHQLSCVDLLHVNTDGVILTKQKAEKVIGWSKNHYLSSCLLPSVKGERLCIPRESLEIAISRLKGQENISQKPSQNLKNLAKDEFESNFISAVVPPGEIGVKFDDIGALENVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLSPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIFLAQENLDPNFEYDKLANLTEGYSGSDLKNLCVAAAYRPVQELIEEENIAQGGTNSTTTVLRPLNLDDFIQSKSKVGPSVAYDATSMNELRKWNEMYGEGGSRTKASFGF 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00984 1049 Pfam AAA+ lid domain 950 985 IPR041569 -
Aip03g00984 1049 MobiDBLite consensus disorder prediction 273 306 - -
Aip03g00984 1049 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1049 - -
Aip03g00984 1049 MobiDBLite consensus disorder prediction 357 388 - -
Aip03g00984 1049 Pfam ATPase family associated with various cellular activities (AAA) 796 926 IPR003959 GO:0005524|GO:0016887
Aip03g00984 1049 SMART AAA_5 792 929 IPR003593 -
Aip03g00984 1049 Gene3D - 928 1013 - -
Aip03g00984 1049 MobiDBLite consensus disorder prediction 308 322 - -
Aip03g00984 1049 ProSitePatterns AAA-protein family signature. 899 918 IPR003960 GO:0005524|GO:0016887
Aip03g00984 1049 MobiDBLite consensus disorder prediction 273 324 - -
Aip03g00984 1049 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 754 976 IPR027417 -
Aip03g00984 1049 CDD AAA 794 927 - -
Aip03g00984 1049 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 1049 - -
Aip03g00984 1049 MobiDBLite consensus disorder prediction 363 381 - -
Aip03g00984 1049 Gene3D - 754 1022 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00984 Aip-Chr3 9490721 9499630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00984 790 976 Calmodulin-binding Proteins AT3G56690 36.979 1.60e-31 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00984 - - gmx:100802939 1605.11