Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00976 ATGTTCAAGGCACTCAGTACTCACTCCAGAGTTGCCATGACCGCTTTACTCGCTCGCCGAGGCGCGGCGATtgtgaaggtgaagcgggtgaaggaagaaagggagcattccaacccatggcatccgacggagCTCGGCCACAAGTCCGACGGCCAGACCATCAAGTGGCTCCTCCGCCAGGCCGAGCCCTCAATCATTGCCGCCACCGGAACCGGAACCACTCCCGCTAGCTTCTCCTCCGTTTCCGTCTCCGTACGCGGCGGTGCTGGCTCTCTCTCTTCTCCTTCCTCAACCTCCGCATCGTCTTCGCTCGACCACAAGCCCTTGCTCGCTCCCACTCCCTTCATACTCGGCAAGTGCATACGCACTGACGACGACGCTTCCGCCAAGGATGACGACGTCTCCGTGGGCCCGCCGTGGGGTCCTTAG 429 0.5361 MFKALSTHSRVAMTALLARRGAAIVKVKRVKEEREHSNPWHPTELGHKSDGQTIKWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGAGSLSSPSSTSASSSLDHKPLLAPTPFILGKCIRTDDDASAKDDDVSVGPPWGP 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00976 142 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 43 139 - -
Aip03g00976 142 MobiDBLite consensus disorder prediction 29 43 - -
Aip03g00976 142 MobiDBLite consensus disorder prediction 29 48 - -
Aip03g00976 142 MobiDBLite consensus disorder prediction 69 110 - -
Aip03g00976 142 MobiDBLite consensus disorder prediction 69 106 - -
Aip03g00976 142 Pfam TCP family transcription factor 44 100 IPR017887 -
Aip03g00976 142 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 43 139 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00976 Aip-Chr3 9410199 9412295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00976 44 137 TCP Transcription Factor Family AT5G23280 63.918 4.20e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip03g00976 TCP 5.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00976 K16221 - aip:110269354 193.741