Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00965 ATGGCTCCTAAACGAGGTGGAAAAGCGCCAGTTCCAGCTTCGAAGAAGAAGCCTGAGAAGGTTACGAACCCGTTGTTCGAGAAGCGTCCTAAGCAGTTCGGGATCGGAGGAGCATTGCCGCCAAAGAGGGATTTGACTCGTTTCGTGAAGTGGCCTAAGACCGTACAAATCCAGAGGAAGAAGAGGATCCTTAAGCAGAGGTTGAAGGTTCCACCAGCTTTGAACCAGTTCACCAAGACCCTTGACAAGAACCTTGCAACCAGCCTTTTCAAGATACTTCTGAAGTACAGGCCAGAGGATAAAGCTGAAAAGAAGGAGCGACTTTTGAAAAGGGCCCAGGCCGAGACTGAGGGCAAAACTGTTGAAGCTAAGAAGCCTATTGTTGTGAAGTATGGTCTCAATCACGTTACCTACCTTATTGAGCAGAACAAAGCTCAATTGGTTGTGATTGCTCATGATGTGGACCCAATTGAATTGGTTGTCTGGCTTCCCGCATTGTGTAGGAAGATGGAAATTCCATACTGCATTGTCAAGGGCAAGGCTCGCCTTGGATCGATTGTCCACAAGAAGACGGCATCTGTTTTNTTAATTTCAACTAAATTATCTTAG 609 0.4647 MAPKRGGKAPVPASKKKPEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAEKKERLLKRAQAETEGKTVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVXLISTKLS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00965 202 PRINTS Ribosomal protein L7A family signature 30 47 IPR001921 -
Aip03g00965 202 PRINTS Ribosomal protein L7A family signature 67 86 IPR001921 -
Aip03g00965 202 PRINTS Ribosomal protein L7A family signature 125 145 IPR001921 -
Aip03g00965 202 PRINTS Ribosomal protein L7A family signature 47 64 IPR001921 -
Aip03g00965 202 PRINTS Ribosomal protein L7A family signature 91 104 IPR001921 -
Aip03g00965 202 PRINTS Ribosomal protein L7A family signature 186 202 IPR001921 -
Aip03g00965 202 SUPERFAMILY L30e-like 89 197 IPR029064 -
Aip03g00965 202 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 116 198 IPR004038 -
Aip03g00965 202 MobiDBLite consensus disorder prediction 1 37 - -
Aip03g00965 202 ProSitePatterns Ribosomal protein L7Ae signature. 167 184 IPR004037 GO:0042254|GO:1990904
Aip03g00965 202 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 2 199 - -
Aip03g00965 202 Gene3D - 51 201 IPR029064 -
Aip03g00965 202 MobiDBLite consensus disorder prediction 12 26 - -
Aip03g00965 202 PANTHER - 2 199 - -
Aip03g00965 202 PRINTS Ribosomal protein L7A/RS6 family signature 129 143 IPR018492 -
Aip03g00965 202 PRINTS Ribosomal protein L7A/RS6 family signature 148 161 IPR018492 -
Aip03g00965 202 PRINTS Ribosomal protein L7A/RS6 family signature 174 188 IPR018492 -
Aip03g00965 202 PRINTS Ribosomal protein L7A/RS6 family signature 164 174 IPR018492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00965 Aip-Chr3 9316704 9318324 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00965 1 199 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 82.915 3.89e-122 344