Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00947 ATGCTACCATCAGTTTTATGTAATCTTTCCAATATCCATGATCACGCAACAACCACTTTGAAGCAATGTGGAGGTACTTTTTTGTTCAAAGGTCCCTGGTTCACAAACCTCAACTTTCTCATCACCAGTGATCCTATGAATGTGCACCACATTACTAGCAAGAACTTTGACAACTACATCAAAGGCTCTGAGTATTATGAGATCTTTGAAATACTCGGAGATGGCATCTTTAACACTGATTCTCACAAATGGAAGCATAGCAGGAACATACTTCATTCATTGTTCAGACAAAACTCGTTTGAGAGTTTAGTTGTGAAAACCATTCATAAGAAGCTCCACAGTTGCCTAGTTCCACTTCTCAACGATGTATCAGAATCAGGAACTGTTGTGGACTTGCAAGACATCTTTCAGAGAATCAGTTTTGACAACATCTGCTCCATAGTGTTGGGGTTTGATCCTAAATCCCTTCCTAACAAGCTCATCGAGTTCCCGGAAGTTGCTTTCGAGAAAGCTTTCAACATGGCAGAGGATGCAATATTCTACAGACACCTTGTCCCAAGGTTTTTATGGAAGCTTCAGAAATGGCTCCAAATTGGACAAGGGAAGACCTATACTGAATGTGAAAAGATAGTTGACCAATTCTTGCATCAGTGTATATCATCCACATTCCAAGAGAAAAGCCAAGTCAAGTGCACCAAAGATGATGATGAACCAACATTTAACATGCTCAAAGCTCTTGTGGAGGAAAGTGGAATGGAACAAATAGATCGCAAGTTTCTAAGAGATAATGCATTGACTCTGTTAGTAGCTGGAAGGGATACAATTAGTTCAAGTCTCAGTTGGTTTTTCTGGCTAGTTTCAACCCACCCTGTTGTTGAAGCCAAGATCCTTGAAGAAATCAGAGCAAACTTTATAACCAAAGAAGAATATTGGCTCATCACTTCAAGGGTAGAAAATCTTAACAAGCTAGTTTACCTGCATGGAGCTATGTGTGAAGCATTGAGACTTTTTCCTCCAGTTCCTTTCGAGCACAAATCTGCAGTTAAATCTGATATACTCCCTAGTGGACATCGTGTTAATGCAAATAGTATGGTAATTTACTCTCTATATTCAATGGGAAGAATGGAACAAACATGGGGAGAAGATTGCTTGGAGTTCAAGCCAGAAAGGTGGGTTTCTGAAAAGGGAAGCATCATACACATACCATCTTACAAGTTCATAGCTTTCAATGCAGGACCAAGAAGTTGTTTGGGTAAAAATATAACCTTTATTCAGATGAAGATCATGGCCATTGCTTTGCTGTGCAATTTTCAGTTTGAGGTGGTGGAAGGGCATAATAATGTGTGTCCATGTGTTTCTGTTGTGCTTCACATGAAACATGGCTTGAAGGTCAAGGTTACTAAAAGAGGCATTATTAATTAG 1422 0.3945 MLPSVLCNLSNIHDHATTTLKQCGGTFLFKGPWFTNLNFLITSDPMNVHHITSKNFDNYIKGSEYYEIFEILGDGIFNTDSHKWKHSRNILHSLFRQNSFESLVVKTIHKKLHSCLVPLLNDVSESGTVVDLQDIFQRISFDNICSIVLGFDPKSLPNKLIEFPEVAFEKAFNMAEDAIFYRHLVPRFLWKLQKWLQIGQGKTYTECEKIVDQFLHQCISSTFQEKSQVKCTKDDDEPTFNMLKALVEESGMEQIDRKFLRDNALTLLVAGRDTISSSLSWFFWLVSTHPVVEAKILEEIRANFITKEEYWLITSRVENLNKLVYLHGAMCEALRLFPPVPFEHKSAVKSDILPSGHRVNANSMVIYSLYSMGRMEQTWGEDCLEFKPERWVSEKGSIIHIPSYKFIAFNAGPRSCLGKNITFIQMKIMAIALLCNFQFEVVEGHNNVCPCVSVVLHMKHGLKVKVTKRGIIN 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00947 473 PRINTS P450 superfamily signature 270 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00947 473 PRINTS P450 superfamily signature 328 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00947 473 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00947 473 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00947 473 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 470 - -
Aip03g00947 473 PRINTS E-class P450 group I signature 259 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00947 473 PRINTS E-class P450 group I signature 279 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00947 473 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00947 473 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00947 473 Pfam Cytochrome P450 39 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00947 473 SUPERFAMILY Cytochrome P450 10 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00947 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Aip03g00947 473 PANTHER CYTOCHROME P450 1 470 - -
Aip03g00947 473 Gene3D Cytochrome P450 2 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00947 Aip-Chr3 9127255 9128676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00947 1 470 Cytochrome P450 AT2G23180 45.912 6.99e-156 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00947 - - gmx:100791312 564.303