Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00946 ATGCTCAAAGCTATTGTGGAGGAAAGCGAAATGGAAAAAATAGATCGCAAGCTTCTAAGAGACAATGCAATTAGTCTCTTATTAGCAGGAAGGGATACAATTAGTTCAGGTCTCAGTTGGTTTTTCTGGCTAGTTTCAACCCACCCTTTTGTCGAAGCCAAGATCCTTGAAGAAATCAGAGCAAACTTCATAACCAATGAAGAAAATTGGCTCATCACTTCAAGATTGGAAAATCTTAACAAGCTAGTTTACCTGCATGGAGCTTTGTGTGAAGCATTGAGACTTTTCCCTCCGGTTCCTTTCGAGCACAAATCTGCAGTTAAATCAGATATACTCCCCAGTGGGCATCGTGTTAATGCAAATACTATGGGGATTTACTCTTTATACTCAATGGGAAGAATGGAACAAATATGGGGAGAAGATTGCTTGGAGTTTAAGCCAGAAAGGTGGATTTCTGAAAAGGGAAGCATCATACACATACCATCTTACAAGTTCATAGCTTTCAATGCAGGCCCAAGAAGTTGTTTGGGTAAAAATATAACCTTTATTCAGATGAAGATCGTCGCCATTGCTTTGCTCTGCAATTTTCAGTTTGAGGTGGTGGAAGGGCATAATAATGTGTATCCATGTGTTTCTATTATTCTTCACATGAAACATGGCTTGAAGGTCAAGGTTACTAAAAGAGGTATTAATTAG 696 0.3894 MLKAIVEESEMEKIDRKLLRDNAISLLLAGRDTISSGLSWFFWLVSTHPFVEAKILEEIRANFITNEENWLITSRLENLNKLVYLHGALCEALRLFPPVPFEHKSAVKSDILPSGHRVNANTMGIYSLYSMGRMEQIWGEDCLEFKPERWISEKGSIIHIPSYKFIAFNAGPRSCLGKNITFIQMKIVAIALLCNFQFEVVEGHNNVYPCVSIILHMKHGLKVKVTKRGIN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00946 231 PRINTS E-class P450 group I signature 18 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00946 231 PRINTS E-class P450 group I signature 165 175 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00946 231 PRINTS E-class P450 group I signature 38 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00946 231 PRINTS E-class P450 group I signature 175 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00946 231 PANTHER CYTOCHROME P450 6 229 - -
Aip03g00946 231 SUPERFAMILY Cytochrome P450 8 228 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00946 231 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 229 - -
Aip03g00946 231 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 168 177 IPR017972 GO:0005506|GO:0016705
Aip03g00946 231 Gene3D Cytochrome P450 1 229 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00946 231 Pfam Cytochrome P450 8 205 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00946 231 PRINTS P450 superfamily signature 166 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00946 231 PRINTS P450 superfamily signature 29 46 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00946 231 PRINTS P450 superfamily signature 87 98 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00946 231 PRINTS P450 superfamily signature 175 186 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00946 Aip-Chr3 9108556 9109251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00946 15 229 Cytochrome P450 AT2G23180 59.070 1.46e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00946 - - ahf:112735737 365.155