Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00944 ATGCTACCAGCACTTTTATGTAATCTATCCAATATCCATGATTATGCAACCACTATTTTGAAGCACTATCAAGGTACTTTCCTGTTCAAAGGTCCCTGGCTCACAAACCTTGACTTTCTCATCACCGTTGACCCTATGAACGTGCACCACATTACCAGCAAGAACTTTGACAACTACATTAAAGGGCCTAAGTTCTATGAGATTTTTGAAATCATGGGAGATGGCATCTTTAACATCGATTCCGACAAATGGAAGCGCAACAGGGACACACTGCACTCGTTGTTCAAACAAAACTCGTTTGAGAGTTCGTTTGTGAAAACCATTCATAAGAAGCTGGAGAGTTGCCTAGTTCCACTTCTCAATGATGCATCGGAACTTGGAACCATTGTGGACTTGCAAGACATTTTTCAGAGATTCACCTTTGACAACATCTGCTCCATAGTGCTGGGCTTTGATCCTAACTCCCTTCCTAACAAGCTCATGGATGAGTTCCCGGAAAACGCTTTTGAGACAGCTTTCAACAAGATGGAAGATGGAATGTTCTACAGACACATTGCCCCAAGATTTTTGTGGAAGCTTCAAAAGTGGCTCCAAATTGGACAAGAGAAGAGCTACGGTGAATGTCGAAAAATAATTGACCAATTCTTGCATCAATTTATATCATCCACATTCCAAGAGCAAAACAAATTCAACTACACCAAAGATGATGATGAATCGAAATTTAACATGCTTAAAGCTCTTGTAATGGAAAGTGGAATGGAAACAATAGAGCCCAAGTTTCTAAGAGACAATGCACTTAATCTCTTAGCAGCAGGAAGGGATGCAATCAGTGCAAGTCTCAGTTGGTTTTTTTGGCTGGTTTCAACCCACCCTCTTGTTGAAGCCAAGATTCTTGAAGAATTTAGAGCAAACCTGATAACCAAGGAAGAAAATTGGGTCATCACTTCAAGGTTAGAAATTCTTAACAAGCTAGTTTATCTGCATGGAGCTTTATGTGAAGCATTGAGACTTTTCCCTCCACTTCCTTTTGAACACAAATGTGCAGTTAAATCTGATATACTTCCTAGTGGGCATCGTGTTAATGCAAATACTATGATACTTTACTCTTTGTACTCAATGGGAAGAATGGAACAAATATGGGGAGAAGATTGCTTGGAGTTTAAGCCAGAAAGGTGGATTTCTGAAAAGGGAAGCATCATACACGTACCATCTTACAAGTTCATAGCTTTCAATGGAGGCCCAAGAAGTTGTTTGGGTAAAAATATAAGCTTTATTCAGATGAAGATCATCGCCATTGCTTTGCTGTTGAATTTTCAGTTTGAGGTGGTGAAAGGGCATAATGTGTGCCCATGTCTTTCTGTTATTCTTCACATGAAACATGGCTTGAAGGTCAAGGTTACTAAAAGAGCCTCATCCCACACTGATGTCCGTGCCCGTGTTGACGCTACCGCACCACCACACCAATATAGGTGCAGTCTAACAGTGCAATGTTGTCCCTCCGCAGCTCGTGCAGACAGCCGTGAAGAGAACAATCCCATTCAATTGGCTTAA 1551 0.4101 MLPALLCNLSNIHDYATTILKHYQGTFLFKGPWLTNLDFLITVDPMNVHHITSKNFDNYIKGPKFYEIFEIMGDGIFNIDSDKWKRNRDTLHSLFKQNSFESSFVKTIHKKLESCLVPLLNDASELGTIVDLQDIFQRFTFDNICSIVLGFDPNSLPNKLMDEFPENAFETAFNKMEDGMFYRHIAPRFLWKLQKWLQIGQEKSYGECRKIIDQFLHQFISSTFQEQNKFNYTKDDDESKFNMLKALVMESGMETIEPKFLRDNALNLLAAGRDAISASLSWFFWLVSTHPLVEAKILEEFRANLITKEENWVITSRLEILNKLVYLHGALCEALRLFPPLPFEHKCAVKSDILPSGHRVNANTMILYSLYSMGRMEQIWGEDCLEFKPERWISEKGSIIHVPSYKFIAFNGGPRSCLGKNISFIQMKIIAIALLLNFQFEVVKGHNVCPCLSVILHMKHGLKVKVTKRASSHTDVRARVDATAPPHQYRCSLTVQCCPSAARADSREENNPIQLA 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00944 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 410 419 IPR017972 GO:0005506|GO:0016705
Aip03g00944 516 PRINTS P450 superfamily signature 329 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00944 516 PRINTS P450 superfamily signature 271 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00944 516 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00944 516 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00944 516 SUPERFAMILY Cytochrome P450 10 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00944 516 Pfam Cytochrome P450 33 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00944 516 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 469 - -
Aip03g00944 516 PANTHER CYTOCHROME P450 1 469 - -
Aip03g00944 516 PRINTS E-class P450 group I signature 260 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00944 516 PRINTS E-class P450 group I signature 280 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00944 516 PRINTS E-class P450 group I signature 417 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00944 516 PRINTS E-class P450 group I signature 407 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00944 516 Gene3D Cytochrome P450 2 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00944 Aip-Chr3 9066472 9068652 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00944 1 472 Cytochrome P450 AT4G32170 46.025 7.66e-154 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00944 - - gmx:100791312 578.17