Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00940 ATGAGATCTTTGAAATTCTTGGAGATGGAATCTTTAATGCTGATTCAGACAAGTGGAAGTACCAGAGAATCAAGAACTATTGTGGACTTGCAAGACATCTTTCAAAGGTTCACTTTTGATAGTATTTGCTCCATGGTGTTGGCATTTGATCCCAATTGCCTTCCTAACAAGCTCACTCAATTCCCTGAGGTTGCTGTTGAGAAAGCTTTCAACAAAATGGAGGATACAATTCTCTACAGACATCTGGTCCCAAGATGGTTCTGGAAGTTGCAGAGATGGCTCCAAATTGGACATGAGAAGGACTCCATTGCTATCCTTCGAGTTGCCGAGCAATTCTTCCATGATCGTATATCAATCAGTCGGAAAGAGAAAAGTAGATTCAACTACACCAAAGATGATGAATCAAACTTTGACATGCTTAAAGCTCTTGTGGAGGAAAGTGGAATGGAACAGGTAGATCACAAGTTTTTAAGAGACATTGCAGTTAATCTCTTAGCAGCTGGAAGGGACACAATTAGTGCAAGTCTATGTTGGTTTTTCTGGCTTGTTTCAACTCACCCTAATGTTGAAACCAAAATCCTTGCAGAAATCAGATCAAACTTCAAAACTAATGAAGAAAATTGGCGGGTGGAAGACCTTGACAAGCTAATTTACTTGCATGGAGCCATATGTGAAGCTCTGAGGCTTTTCCCTCCGGTGCCATTTGAGCACAAATGTGCCATCAAATCTGATATACTTCCAAGTGGAGATCGTGTTGATGCAAATACTATGGTGTATTACTCCATATACTCAATGGGAAGGATGGAACAAATATGGGGAAAAGATTGCTTGGAATTTAAGCCAGAAAGGTGGATTTCGGAAAAAGGAATCAATATACAGGTACCATCATACAAGTTCATGGCTTTTAATGCAGGCCCCAGAAGTTGTTTGGGCAAAAATATAAGCTTTATCCAGTTGAAGATCATTGCCATTGCTTTGCTGTGGAACTTTCACTTCCAAGTGGTGGAAGGGAATTCCGTATGTCCAAGTGTTTCCATTGTGCTACACATGAAGCATGGGTTGCAAGTCAAGGTTACTAAAAGAGGCAATTGA 1092 0.4038 MRSLKFLEMESLMLIQTSGSTRESRTIVDLQDIFQRFTFDSICSMVLAFDPNCLPNKLTQFPEVAVEKAFNKMEDTILYRHLVPRWFWKLQRWLQIGHEKDSIAILRVAEQFFHDRISISRKEKSRFNYTKDDESNFDMLKALVEESGMEQVDHKFLRDIAVNLLAAGRDTISASLCWFFWLVSTHPNVETKILAEIRSNFKTNEENWRVEDLDKLIYLHGAICEALRLFPPVPFEHKCAIKSDILPSGDRVDANTMVYYSIYSMGRMEQIWGKDCLEFKPERWISEKGINIQVPSYKFMAFNAGPRSCLGKNISFIQLKIIAIALLWNFHFQVVEGNSVCPSVSIVLHMKHGLQVKVTKRGN 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00940 363 PRINTS E-class P450 group I signature 299 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00940 363 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00940 363 PRINTS E-class P450 group I signature 309 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00940 363 PRINTS E-class P450 group I signature 176 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00940 363 PRINTS E-class P450 group I signature 156 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00940 363 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 302 311 IPR017972 GO:0005506|GO:0016705
Aip03g00940 363 PANTHER CYTOCHROME P450 25 357 - -
Aip03g00940 363 PANTHER CYTOCHROME P450 FAMILY PROTEIN 25 357 - -
Aip03g00940 363 Pfam Cytochrome P450 6 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00940 363 SUPERFAMILY Cytochrome P450 18 361 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00940 363 PRINTS P450 superfamily signature 221 232 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00940 363 PRINTS P450 superfamily signature 309 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00940 363 PRINTS P450 superfamily signature 300 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00940 363 PRINTS P450 superfamily signature 167 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00940 363 Gene3D Cytochrome P450 6 363 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00940 Aip-Chr3 8971175 8972376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00940 23 363 Cytochrome P450 AT2G23180 44.034 5.23e-108 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00940 - - adu:107477001 517.309