Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00931 ATGGGAAGAAAAAGAACAAGATCCTCTGTTTTCTACTCTGTTTTCTTCGTCTCTGTTCTCTGTTTTCTCTCTCAACTTGCAACCTCAGAGGACGATTCCCAAGCGCTTTTGGCACTGAAATCTTCCATAGACGCACTCAACAAGCTTCCATGGCGACCAGGCAGCGATGTCTGCACATGGCAAGGTGTCAAAGACTGCTTCAATGGAAGGGTAAGAAAGCTTGTTATAGAATACTCCAACCTCACCGGAACCTTAGAATCGAAGATCCTGAACCGTTTGGATCAGCTTCGAGTTCTAAGCTTCAAAGGGAACTCACTCTCTGGTCAAATTCCACAACTTTCAAGCTTGGTCAACCTCAAATCAATTTTCCTAAACGACAACAACTTCTCCGGAGAGTTTCCGGCCTCTGTTTCCGACCTCCACCGTGTAAAAGTCATAGTTTTGTCAGGGAACAGAATCTCCGGCGACATTCCGGCGTCGTTGCTGAATCTCCGGCGACTCTACATGCTCTACTTGGAGGACAACTTGTTCACCGGGAAAATCCCGGGGTTCAACCAAACAAGTCTCAGGTACTTAAACGTTTCGAATAACAAACTCTCCGGCGAGATCCCGGCGACTCCGGCATTGGTACGGTTCAATGCATCTTCGTTTTCCGGCAACACTAATCTCTGCGGCGATCAAGTCCACGTGCCATGCAAAAGTAACATCCTTTTGCCTCCTTCTATGAGCCCAAGTTCCTCCACGGTTCCAACAACAGCAAAGAAAAAAACATCATCGAACCGCACGAAACTAATCAAGATTATTGGAGGAACCGTTGGTGGTGTTGTTTTGTTGCTCATTGTTTTGGTTCTTGTCTTCTTCACCATTTGTAGAAACCGTAGGAAGAGGGTAGGTGCTGGAGCTAGAAGGAAAGGAAATGGGGTTGGAAGTGTGGAGGAAGTTGAAGATGTTGGCGGCGGAGGAGGCGGCGGCGGGGGCGGTGGCAGCAGTGGTAACAACGAAGGGAAACAAGGTGGTTTTGCATGGGAAGGTGAGGGTCTAGGGAAGTTGGTGTTCTTAGGAGCAGGGGATAATAGGGAAATGAGTTACACACTAGAGGATTTGCTTAAGGCTTCAGCTGAGACACTTGGGAGGGGCATTATGGGAAGTACATATAAGGCAGTTATGGAATCAGGGTTTATTGTAACTGTTAAGAGATTGAAGGATGCTAGGTACCCTAATTTGGATGAGTTTAAGGCACATATTGAAGTTCTTGGTAGGCTTAGGCACCCTAATTTGGTCCCACTTAGGGCTTATTTTCAGGCTAAGGAGGAAAGGCTTCTTGTTTATGATTATTTCCCTAATGGCAGCCTCTTCTCTCTCATTCATGGATCAAAAACATCCGGTGGAGGAAAGCCTCTTCATTGGACATCCTGCCTCAAAATCGCCGAAGATCTCGCCACCGGCCTACTCTACATCCACCAAAACCCCGGCTTAACTCATGGAAACCTTAAATCTTCTAATGTCTTGCTGGGTTCGGACTTCGAATCCTGTCTTACTGACTATGGACTCACCATGTTCCTTAACCCTGACTCAATGGATGAACCAAGTGCCACCTCTTTATTCTACAGAGCACCCGAATGCAGAAGCTTCCAGAGGTCTCACACGCAACCGGCCGATGTATACAGCTTCGGAGTCCTTCTCCTGGAACTCTTAACAGGAAAAACACCCTTCCAAGACCTTGTCCAAGAACACGGCTCGGATATACCAAGATGGGTTAAATCGGTTCGTGAGGAAGAGACAGAGTCCGGGGATGATCCTTCCTCGGGCAATGAAGCGTCCGAAGAGAAGCTTCAAGCTCTCTTGAACATTGCAATGGCATGTGTTTCGCTTGTGCCGGAGAACCGGCCTACGATGAGGGAAGTTCTGAAGATGATAAGAGACACAAGAGGGGAAGCTCAGGTATCATCAAATAGTAGTGATCATTCACCAGGTAGATGGTCAGATACAGTTCAAAGCTTTCCAAGGGAAGAACACTTGAGCATATGA 2028 0.4724 MGRKRTRSSVFYSVFFVSVLCFLSQLATSEDDSQALLALKSSIDALNKLPWRPGSDVCTWQGVKDCFNGRVRKLVIEYSNLTGTLESKILNRLDQLRVLSFKGNSLSGQIPQLSSLVNLKSIFLNDNNFSGEFPASVSDLHRVKVIVLSGNRISGDIPASLLNLRRLYMLYLEDNLFTGKIPGFNQTSLRYLNVSNNKLSGEIPATPALVRFNASSFSGNTNLCGDQVHVPCKSNILLPPSMSPSSSTVPTTAKKKTSSNRTKLIKIIGGTVGGVVLLLIVLVLVFFTICRNRRKRVGAGARRKGNGVGSVEEVEDVGGGGGGGGGGGSSGNNEGKQGGFAWEGEGLGKLVFLGAGDNREMSYTLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPNLDEFKAHIEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLTMFLNPDSMDEPSATSLFYRAPECRSFQRSHTQPADVYSFGVLLLELLTGKTPFQDLVQEHGSDIPRWVKSVREEETESGDDPSSGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDTRGEAQVSSNSSDHSPGRWSDTVQSFPREEHLSI 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00931 675 SUPERFAMILY L domain-like 29 224 - -
Aip03g00931 675 Pfam Protein kinase domain 373 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00931 675 ProSiteProfiles Protein kinase domain profile. 370 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g00931 675 Pfam Leucine rich repeat N-terminal domain 30 63 IPR013210 -
Aip03g00931 675 Gene3D Transferase(Phosphotransferase) domain 1 446 662 - -
Aip03g00931 675 MobiDBLite consensus disorder prediction 586 607 - -
Aip03g00931 675 Pfam Leucine Rich Repeat 188 205 IPR001611 GO:0005515
Aip03g00931 675 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 8 665 - -
Aip03g00931 675 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 665 - -
Aip03g00931 675 Gene3D Ribonuclease Inhibitor 29 184 IPR032675 -
Aip03g00931 675 Gene3D Ribonuclease Inhibitor 185 235 IPR032675 -
Aip03g00931 675 MobiDBLite consensus disorder prediction 644 675 - -
Aip03g00931 675 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Aip03g00931 675 Gene3D Phosphorylase Kinase; domain 1 353 445 - -
Aip03g00931 675 MobiDBLite consensus disorder prediction 643 675 - -
Aip03g00931 675 MobiDBLite consensus disorder prediction 301 337 - -
Aip03g00931 675 SUPERFAMILY Protein kinase-like (PK-like) 374 650 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00931 Aip-Chr3 8894241 8899949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00931 13 675 Receptor kinase-like Gene Family AT1G60630 61.826 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip03g00931 Pkinase 8.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00931 - - gmx:100820186 963.37