Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00928 ATGGCGGCTACCGTTTCTGCGTGGTCGAAGCCAGGTGCGTGGGCTTTGGATTCTGAGGAACATGAAGCTGAGCTCCTTCAACAGCAAACTAGCAACAATAACGAAACTGCCCTCACCGGAAAACCACTAGCCGACTTCCCATCTTTGGCTGTGGCGGCCGCCGCAAAACCCAAGAAGAAGAAAGGCCAGACCTTTTCCCTTGCTGAGTTCACTGCCGCCAAAACGGACTACCAAGATCCCATCGTGCTCCCCACCGGTCCGCGCCAGCGCACCGCCGAGGAGCTCGACCGCGACCGCAACCGTCTTGGTGGTGGCTTCAGGAACTACGGCGGTGACCGCGCCAACAGAAGCTCCGGTGGTGGTGATGATTCCTCCAATTCGAGGTGGGGTTCCTCTAGGGTTTCTGACGAGCCGAGGCGGAACGGTGGGTTTAGGGATTCGAATCGCGAATTGGCTCCTTCCCGCGCCGATGAGATTGATAATTGGGCCGCCGCGAAGAAATCAACGGTCGGTAACGGTTTCGAGAGGAGGGAAAGGGATAGGGATAGGGAAAGGAGCGGTTTTTTCGATTCCCAATCGCGTGCTGATGAATCCGATAGTTGGGTTACGAACAAGAGTTCTGTGCCGTCAGAGAGTCGGAGATTCGGTTCCAACGGCGGTTCTGGTGGTCTTGGGTTTGAAAGAGAGAGGAAGGTAGGGTTTGGGTCTAGCGGCGGCGCAGATTCTGATAATTGGAACAAGAAAAAGGTTGAATTTAACGGTGGAAGTGAGAGGAGTGAAGGTGGTGGTGGGAGACCTAGGCTTGTTCTGCAACCTCGTACAGCGCCTGTGAACAATGAGAGCCAGGAGGGTGCTGGTAATGGTAATGGTAATGTGGTGAAACCAAAGGGTCCGAGCCCATTCGGCGAGGCGAGACCGAGGGAGGAGGTGCTGGCGGAGAAGGGGCAGGATTGGAAGAAGATTGATGAGCAGCTTGAGAGCGTGAAGATTAAGGAGGCTGCTGAGAAAAAAGAGAGTTTTGGAAAGAGGGGTTTTGGTTCTGGCAATGGACGTGGTTCTAGTTTGTCTGAAGCCAGGACTGAGCGGAGTTGGAGGAAGCCGGAATCCGAGACAGAGCGGAAGGCAGAATCTGAGACCGAGAGCAAGCCGGAATCTGATGATGGTCGTCCGAAAAGTGCTGATTCTGAGAAAATGGAGGATGAACATGTTGAAGAAAACTGA 1221 0.5422 MAATVSAWSKPGAWALDSEEHEAELLQQQTSNNNETALTGKPLADFPSLAVAAAAKPKKKKGQTFSLAEFTAAKTDYQDPIVLPTGPRQRTAEELDRDRNRLGGGFRNYGGDRANRSSGGGDDSSNSRWGSSRVSDEPRRNGGFRDSNRELAPSRADEIDNWAAAKKSTVGNGFERRERDRDRERSGFFDSQSRADESDSWVTNKSSVPSESRRFGSNGGSGGLGFERERKVGFGSSGGADSDNWNKKKVEFNGGSERSEGGGGRPRLVLQPRTAPVNNESQEGAGNGNGNVVKPKGPSPFGEARPREEVLAEKGQDWKKIDEQLESVKIKEAAEKKESFGKRGFGSGNGRGSSLSEARTERSWRKPESETERKAESETESKPESDDGRPKSADSEKMEDEHVEEN 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00928 406 MobiDBLite consensus disorder prediction 274 288 - -
Aip03g00928 406 MobiDBLite consensus disorder prediction 25 39 - -
Aip03g00928 406 MobiDBLite consensus disorder prediction 133 162 - -
Aip03g00928 406 MobiDBLite consensus disorder prediction 358 406 - -
Aip03g00928 406 Pfam Plant specific eukaryotic initiation factor 4B 7 330 IPR010433 GO:0003743
Aip03g00928 406 MobiDBLite consensus disorder prediction 171 192 - -
Aip03g00928 406 MobiDBLite consensus disorder prediction 76 406 - -
Aip03g00928 406 MobiDBLite consensus disorder prediction 22 43 - -
Aip03g00928 406 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 377 - -
Aip03g00928 406 MobiDBLite consensus disorder prediction 118 132 - -
Aip03g00928 406 MobiDBLite consensus disorder prediction 193 217 - -
Aip03g00928 406 MobiDBLite consensus disorder prediction 301 342 - -
Aip03g00928 406 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 377 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00928 Aip-Chr3 8864801 8866917 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00928 1 366 Eukaryotic Initiation Factors Gene Family AT4G38710 51.493 8.33e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00928 - - gmx:100820014 437.573