Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00910 ATGTTCACAGAGGATTCAAATCTCATTGTATTATTGTCTTCCATTGCGACGCTGATCTTATATATTTTCATTAGCGTTGTTGGGTCACTGTTAAGAACACTGATTGATGACAGAAGCAGAGTACCAGAGGCATCAACGACAACAGAAACAGAAGAGAGGAGGCAGATAAGAGATACTATTGTGATGGATCATATTGTAAGATTAATGGCTCATCAGAGAGAACATCAAACAAGGCTGCAATTCAATGGTGATTCTGCTGTTATAACTATGGGTAGGAAAGCTTTGAGGGTGTTGCCACCGGTTAAGAGCTTTGTTGTTGAAGATAAAAGCAGTGGATGCTCCCCTCTTGAATGCTCTATTTGCATGGAAGTGTTTAAGGATGGGGAGTTGATTCAACCTCTTGGATTGTGTCCTCATCAGTTTCATTCTTCTTGTCTTTACTCTTGGCTTCATAGTGGAAAATCTACTTGCCCCCTTTGCCGTGTGGATTTAGCAACCACATAG 504 0.4087 MFTEDSNLIVLLSSIATLILYIFISVVGSLLRTLIDDRSRVPEASTTTETEERRQIRDTIVMDHIVRLMAHQREHQTRLQFNGDSAVITMGRKALRVLPPVKSFVVEDKSSGCSPLECSICMEVFKDGELIQPLGLCPHQFHSSCLYSWLHSGKSTCPLCRVDLATT 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00910 167 ProSiteProfiles Zinc finger RING-type profile. 118 161 IPR001841 -
Aip03g00910 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 166 IPR013083 -
Aip03g00910 167 PANTHER OS06G0666500 PROTEIN 72 164 - -
Aip03g00910 167 SUPERFAMILY RING/U-box 117 165 - -
Aip03g00910 167 Pfam Ring finger domain 117 161 IPR001841 -
Aip03g00910 167 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 72 164 - -
Aip03g00910 167 SMART ring_2 118 160 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00910 Aip-Chr3 8721338 8721841 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00910 78 161 C3H Transcription Factor Family AT2G17450 40.659 1.84e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00910 - K10664 aip:107632256 330.102