Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00899 ATGGGCAGAGTAATCTCTTTCCTCGTTCAGCCGCGATTCGTCCTTTTATACCTTGTTCTTTCAATCTTCATCATTTTCGCGCTCTATGGCTCTAAACAAGACGAGGTGATGATATTAGAAGAGGAGCCTGATATTACACACAGGGTTTTTTTGGATATTGATATTGATAAACAGCGCTTAGGTAGGATCGTGATTGGATTATATGGCCATGTTGTACCAAAAACTGTTGAAAATTTCAGAGCTTTGTGCACAGGGGAGAAGGGCAAGAGTTCTAGTGGCGTAAAACTTCACTACAAAGGAACACCACTTCATCGGATAATATCTGGTTTTGTGATTCAGGGTGGAGACATTGTTCATCGTGATGGCAAAGGATCTGAATCTATTTATGGTGGCACCTTTCCTGATGAGAATTTCAAGATAAAAAACTCTCATGCTGGTGTTGTTGCTATGGCAAATTCAGGACCTGATTCAAATGGCTCCCAGTTTTTTATTACCACAGTGAAGGCCTATTGGTTGGATGGTGAGCATGTTGTCTTTGGAAAGGTTATTCAAGGCATGGATAATGTGTTTGCGATCGAAGGGGGAGCTGGAACGTATAGCGGAAAACCCAGAAAGAAGGTGGTGATTGCAGATTGTGGAGAGATACCCAAGAGCCAGTGGGATGAGGAAATTTCAACTTCCAAATCAGTGACAACAACATAA 702 0.4188 MGRVISFLVQPRFVLLYLVLSIFIIFALYGSKQDEVMILEEEPDITHRVFLDIDIDKQRLGRIVIGLYGHVVPKTVENFRALCTGEKGKSSSGVKLHYKGTPLHRIISGFVIQGGDIVHRDGKGSESIYGGTFPDENFKIKNSHAGVVAMANSGPDSNGSQFFITTVKAYWLDGEHVVFGKVIQGMDNVFAIEGGAGTYSGKPRKKVVIADCGEIPKSQWDEEISTSKSVTTT 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00899 233 SUPERFAMILY Cyclophilin-like 44 215 IPR029000 -
Aip03g00899 233 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 50 214 IPR002130 GO:0000413|GO:0003755
Aip03g00899 233 Gene3D - 37 221 IPR029000 -
Aip03g00899 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 67 82 IPR002130 GO:0000413|GO:0003755
Aip03g00899 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 115 IPR002130 GO:0000413|GO:0003755
Aip03g00899 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 146 161 IPR002130 GO:0000413|GO:0003755
Aip03g00899 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 161 173 IPR002130 GO:0000413|GO:0003755
Aip03g00899 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 174 189 IPR002130 GO:0000413|GO:0003755
Aip03g00899 233 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 39 223 - -
Aip03g00899 233 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 39 223 - -
Aip03g00899 233 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 53 213 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00899 Aip-Chr3 8602752 8606019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00899 61 209 U-box Gene Family AT5G67530 42.000 2.46e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00899 - - gmx:100800775 375.17