Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00872 ATGGGTATTCGTATGCCGTTTATGGTGCACCAAGCAAAGCAGGTATTCAAGTCAACATCACAGCATCTACAAGGTGGAAACCAGACAAGTGTTGTTCCAAAGGGACACATAGCAGTGTATGTTGGAGAGTTGCAGAAGAAGCGGTTTGTGGTTCCGATATCATACTTGAGTCATCCTTTGTTTGTTGACTTGCTTCACAGAGCAGAGGAAGAGTTTGGATTCAACCATCCAATGGGAGGACTCACAATTCCATGCAAAGAAGATGCATTTATCAACCTTACCTCTCAACTGGGTGCTTTGTGA 303 0.4389 MGIRMPFMVHQAKQVFKSTSQHLQGGNQTSVVPKGHIAVYVGELQKKRFVVPISYLSHPLFVDLLHRAEEEFGFNHPMGGLTIPCKEDAFINLTSQLGAL 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00872 100 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE 1 98 - -
Aip03g00872 100 Pfam Auxin responsive protein 15 95 IPR003676 GO:0009733
Aip03g00872 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00872 Aip-Chr3 8352888 8353190 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00872 18 90 Calmodulin-binding Proteins AT5G20810 50.685 1.98e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00872 K14488 - gmx:100803474 154.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00872 03 8352888 8353190 Aip03g00872 03 8352888 8353190 ECH