Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00871 ATGGGTGTTCGTGTGATTCCAGAGACGATGATCCAACATGCAAAGCAAATTCTAAGATTGAGGTCTCATCATCATAGTTTTGCAAACAAAATTGATGTGCCAAAAGGGCACTTTGCGGTGTATGTGGGAGATGAAGATAATAACATGAAGCGGTTTGTGGTTCCTATTTCCTTCTTGAAGCAGCCAATGTTCCAAGCTTTGTTGAAAAAGGCTGAGGATGAATTTGGCTTTCACCAACCAATGGGAAATCATCATCTTCTTATTCCTTGTCCTGTTGATCATTTCCTTGATCTCACTTCTCGAATCACCAACAACTAG 318 0.4057 MGVRVIPETMIQHAKQILRLRSHHHSFANKIDVPKGHFAVYVGDEDNNMKRFVVPISFLKQPMFQALLKKAEDEFGFHQPMGNHHLLIPCPVDHFLDLTSRITNN 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00871 105 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 7 102 - -
Aip03g00871 105 Pfam Auxin responsive protein 19 101 IPR003676 GO:0009733
Aip03g00871 105 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 7 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00871 Aip-Chr3 8341972 8342469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00871 32 105 Calmodulin-binding Proteins AT5G20810 48.649 8.55e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00871 K14488 - cam:101505472 118.627