Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00870 ATGAGAACTAGTAACAGAATTGCTCATGCAACACAGAAACTGCAGAGGACTCTGTCACAGAGAATCAAAATGGCTTCAGCAGCAAACATTGCTGATGTTCCAAAAGGCCACTTGGCAGTGTATGTTGGAGAGAATCATAAGAGGTTTGTGATTCCAATATCTTATTTGAGTCAACCTTTGTTCAGAGATTTGTTGGATTGGGCTGAACAAGAATTTGGATTCAATCACCCAACTGGGGGTCTCACAATTCCATGCACTGAGGATTACTTTATTAGTCTAATTTCTTCTCTTCATTAA 297 0.3939 MRTSNRIAHATQKLQRTLSQRIKMASAANIADVPKGHLAVYVGENHKRFVIPISYLSQPLFRDLLDWAEQEFGFNHPTGGLTIPCTEDYFISLISSLH 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00870 98 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 6 97 - -
Aip03g00870 98 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 97 IPR003676 GO:0009733
Aip03g00870 98 Pfam Auxin responsive protein 17 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00870 Aip-Chr3 8333606 8334125 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00870 32 98 Calmodulin-binding Proteins AT5G20810 55.224 7.82e-20 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00870 K14488 - gmx:100781277 171.785