Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00869 ATGGGATTCAGATTGCCTAGTCTTCAAAAGAAAACTTGTGTTCCAAAAGGTTATCTTGCTGTTTATGTTGGAGAGAACCAAAAGAAGCGATTCGTGATACCTATATCATACTTGAACAATCCTTCAATTCAAGACTTGCTAAGTCAAGTTGAACAAGAATTCGGATTTGATCATCCAATGGGTGGCCTCACAATTCCTTGCAGAGAAGATGTCTTCCTAGATATCACTTCTCGGTTGCAAAGATCATAA 249 0.3815 MGFRLPSLQKKTCVPKGYLAVYVGENQKKRFVIPISYLNNPSIQDLLSQVEQEFGFDHPMGGLTIPCREDVFLDITSRLQRS 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00869 82 Pfam Auxin responsive protein 10 78 IPR003676 GO:0009733
Aip03g00869 82 PANTHER - 14 79 - -
Aip03g00869 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 14 79 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00869 Aip-Chr3 8330270 8330674 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00869 14 72 Calmodulin-binding Proteins AT3G43120 52.542 3.94e-15 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00869 K14488 - ahf:114924948 163.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00869 03 8330270 8330674 Aip03g00869 03 8330270 8330674 ECH