Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00865 ATGGGTTTTCGGTTACCCGGTATTGTAAGAAAGGCATCATTTACTTCATCTTCAAAAACTATGGAAATTCCAAAAGGTTATCTTGCAGTTTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCTATATCATACTTGAACCAGCCTTCATTTCAAGACTTGCTAAGTCAAGCTGAGGAAGAATTTGGGTATGATCATCCAATGGGTGGCCTCACAATTCCTTGTGAAGAAAATATGTTCTTAGATATCACTTCTCGCTTGAGTTGA 267 0.382 MGFRLPGIVRKASFTSSSKTMEIPKGYLAVYVGEKMKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCEENMFLDITSRLS 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00865 88 Pfam Auxin responsive protein 16 86 IPR003676 GO:0009733
Aip03g00865 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 87 IPR003676 GO:0009733
Aip03g00865 88 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00865 Aip-Chr3 8324055 8324321 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00865 22 80 Calmodulin-binding Proteins AT3G43120 55.932 2.86e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00865 K14488 - gmx:100787155 146.362