Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00863 ATGGGTTTCCGTTTACCTGTTATTCGAAGGACATCATCATTCTCAGCTAGCCAAGCAGCTTCAAAATCTGTGGAAGTCCCAAAGGGGCATCTAGCAGTGTATGTCGGAGAGAAACAGAAGCGGTTTGTGATCCCCGTTTCATACTTGAACCAACCTTCAATCCAAGACTTGTTGAGCCAAGTTGAGGAAGAGTTTGGATATGATCATCCTATGGGAGGTCTAACAATTCCATGCAGTGAAGATGTCTTCCAACAAATCACTTCTCACTTGAATTGA 276 0.4348 MGFRLPVIRRTSSFSASQAASKSVEVPKGHLAVYVGEKQKRFVIPVSYLNQPSIQDLLSQVEEEFGYDHPMGGLTIPCSEDVFQQITSHLN 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00863 91 Pfam Auxin responsive protein 12 89 IPR003676 GO:0009733
Aip03g00863 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 2 91 IPR003676 GO:0009733
Aip03g00863 91 PANTHER AUXIN-INDUCED PROTEIN 6B 2 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00863 Aip-Chr3 8312369 8312644 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00863 5 84 Calmodulin-binding Proteins AT5G20810 45.000 2.08e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00863 K14488 - gmx:106798972 153.295