Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00862 ATGGCTTTTCGCATTCCAAGTATTAGAAAGGCATCAAAAGGGACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTGGGAGATAAGATGACGAGGTTTGTGATTCCTGTATATTACTTGAATCAACCTTCATTTCAAGAGTTACTAAGCCAATCAGAAGAAGAATTCGGTTATGATCACCCAACTGGCGGTCTCACAATTCCTTGCAGCGAGGATGCCTTCCTGAACCTCACTTGTCAATTAAGTGGGCAGTAA 255 0.4157 MAFRIPSIRKASKGTNVPKGYLAVYVGDKMTRFVIPVYYLNQPSFQELLSQSEEEFGYDHPTGGLTIPCSEDAFLNLTCQLSGQ 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00862 84 Pfam Auxin responsive protein 11 80 IPR003676 GO:0009733
Aip03g00862 84 PANTHER AUXIN-INDUCED PROTEIN 10A5 8 82 - -
Aip03g00862 84 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 82 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00862 Aip-Chr3 8310767 8311021 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00862 16 74 Calmodulin-binding Proteins AT3G43120 54.237 2.46e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00862 K14488 - gmx:113001957 122.094