Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00857 ATGGCTTTCCGCTTACCAAGCATTAGACGGGCCACATCAATTTCTTCATCCAAGCGGACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTTGGAGACAACCTGAGGCGGTTCGTGATTCCTATATCATACTTGAACCAACCTTTGTTTCAAGAATTACTAAACCAAGCAGAAGAAGAATTTGGTTATGATCATCCAAATGGACATCTCACAATTCCATGCAGTGAGGACGAGTTCCAAAACATCAGTTCTCGGTTGAATGGGCTGTAA 270 0.4222 MAFRLPSIRRATSISSSKRTNVPKGYLAVYVGDNLRRFVIPISYLNQPLFQELLNQAEEEFGYDHPNGHLTIPCSEDEFQNISSRLNGL 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00857 89 PANTHER AUXIN-INDUCED PROTEIN 6B 6 87 - -
Aip03g00857 89 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 87 IPR003676 GO:0009733
Aip03g00857 89 Pfam Auxin responsive protein 13 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00857 Aip-Chr3 8301530 8302121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00857 21 80 Calmodulin-binding Proteins AT3G43120 60.000 4.14e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00857 K14488 - gmx:100806671 134.806