Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00853 ATGGTTGTTTGTGTTAAGCAACATAAAACAATGGGCTTTCACTTACCAGCTATTAGAAGAGCATCATCTGCTGTTAGCCAAGAATCTTCCAAAGCTGTGGAACTTCCGAAAGGCTATTTCGCAGTCTATGTTGGAGACAAAATGAAGCGGTTTGTGATTCCAATTTCATATTTAAATCAACCTTTGTTTCAAGAGTTACTAAGCCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGAGGTCTCACTATTCCTTGCAAAGAGGATGCTTTCATGGACCTCATCACTTCTCGCTTGAAGGGATTATAA 312 0.391 MVVCVKQHKTMGFHLPAIRRASSAVSQESSKAVELPKGYFAVYVGDKMKRFVIPISYLNQPLFQELLSQAEEEFGYDHPMGGLTIPCKEDAFMDLITSRLKGL 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00853 103 Pfam Auxin responsive protein 20 97 IPR003676 GO:0009733
Aip03g00853 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 101 IPR003676 GO:0009733
Aip03g00853 103 PANTHER AUXIN-INDUCED PROTEIN 10A5 17 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00853 Aip-Chr3 8176632 8177153 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00853 34 96 Calmodulin-binding Proteins AT3G43120 52.381 3.83e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00853 K14488 - gmx:100806671 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00853 03 8176632 8177153 Aip03g00853 03 8176632 8177153 ECH