Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00852 ATGGCTATTCGTTTGCCTTCTTCGGTGATCCATGCTAAACGTGTCCTCAGCCGGTCTCTTTCAGGTGGCAAAAAAGTGTCTGGAAATGTGCAAAAAGGGTATCTTGCAGTGTATGTTGGAGAAGAGGAGCAAAAGAAGAGATATATGGTTCCTATATCATACTTGCATGAACCTGCTTTTCAACAATTGCTAAGTGAAGCCGAGGAAGAATTCGGATTTAATCACTCAATGGGAGGTCTAACAATTCCTTGCAGTGAAGACATCTTTTGCAGTGTGACTTCTCAGTTAAAAAGTTAG 297 0.4141 MAIRLPSSVIHAKRVLSRSLSGGKKVSGNVQKGYLAVYVGEEEQKKRYMVPISYLHEPAFQQLLSEAEEEFGFNHSMGGLTIPCSEDIFCSVTSQLKS 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00852 98 Pfam Auxin responsive protein 14 94 IPR003676 GO:0009733
Aip03g00852 98 PANTHER SMALL AUXIN-UP RNA-RELATED 16 97 - -
Aip03g00852 98 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 16 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00852 Aip-Chr3 8175502 8175798 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00852 29 89 Calmodulin-binding Proteins AT3G43120 52.459 1.99e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00852 K14488 - qsu:111994736 122.864