Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00850 ATGGGTTTCCGCATTCCAAGTATTAAAAGAGCAACAAAAACAATTTCCAAGGGGATTGATGTACCAAAAGGCTACCTTGCAGTCTATGCTGGAGACAACATGAGGCGGTTCGTGATTCCAATATCATACTTGAACCAACCTTTATTTCAAGAATTGTTGAGTCAAGTTGAAGAAGAATATGGATATGATCATCCAATGGGTGGTCTCACAATTCCGTGCAGCGAGGATGAGTTTCTAAACATCAGTTTCTAA 252 0.3968 MGFRIPSIKRATKTISKGIDVPKGYLAVYAGDNMRRFVIPISYLNQPLFQELLSQVEEEYGYDHPMGGLTIPCSEDEFLNISF 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00850 83 PANTHER SMALL AUXIN-UP RNA-RELATED 1 81 - -
Aip03g00850 83 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 81 IPR003676 GO:0009733
Aip03g00850 83 Pfam Auxin responsive protein 15 80 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00850 Aip-Chr3 8150001 8150513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00850 20 78 Calmodulin-binding Proteins AT3G43120 59.322 2.98e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00850 K14488 - gmx:100806671 134.42