Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00848 ATGCTTGCAGCCATGAACATATATATAGATGAAGGATATGTTGTAAAATTGGTAATTGAATGGTTGGTTGTGGAGGAAGGCTATGAAATGGGACCTATTAGGAGACAAGGGCATTTAAGAGGTCACATGGTGTTGTCTTCGGGGATTTTCTCAAACCTGTTCACATTGGTTTGTGAGGATGTGCCTAAGTTTGGTTCAGAGTTGTGGCCAAGACCCCATTTTACAGCTTCATCAGAATTATTTCTTCAGGATGGCAACTATATATACACTTCTTCTTGTGTTCTCAAACAACACAAATCAGTTGCATCTCCTCAAGTATCAGTACTCACATATTTCTCTCAAATCAAATCCTTCAAGAACAATCTATTTCTTTTTTCTTTTGAACAACAAGAAGAAACAATGGCTTTCCGCATTCCAGGTATTAGAAAGGCATCACTTTCTGCATCAAAAGGAACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTGGGAGATAAGATGAGGCGGTTTGTGATTCCTGTATGTTACTTGAACCAGCCTTCATTTCAAGAATTACTAAACCAAGCAGAAGAAGAATTCGGATATGATCATCCAACCGGTGGTCTCACAATTCCATGCAGTGAGGGTGAGTTCTTAAGTCTCACTTCTCAGTTGGGTGGGCAATAA 666 0.3934 MLAAMNIYIDEGYVVKLVIEWLVVEEGYEMGPIRRQGHLRGHMVLSSGIFSNLFTLVCEDVPKFGSELWPRPHFTASSELFLQDGNYIYTSSCVLKQHKSVASPQVSVLTYFSQIKSFKNNLFLFSFEQQEETMAFRIPGIRKASLSASKGTNVPKGYLAVYVGDKMRRFVIPVCYLNQPSFQELLNQAEEEFGYDHPTGGLTIPCSEGEFLSLTSQLGGQ 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00848 221 Pfam Auxin responsive protein 144 216 IPR003676 GO:0009733
Aip03g00848 221 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 145 219 IPR003676 GO:0009733
Aip03g00848 221 PANTHER AUXIN-INDUCED PROTEIN 10A5 145 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00848 Aip-Chr3 8146998 8148042 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00848 153 206 Calmodulin-binding Proteins AT3G43120 61.111 2.80e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00848 K14488 - gmx:112998555 142.124