Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00846 ATGGCTTTTCGCATTCCAAGTATTAGAAAGGCATCACTTTCTGCATCAAAAGGGACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTGGGAGATAAGATGAGGAGGTTTCTGATTCCTGTATATTACTTGAACCAACCTTTATTTCAAGAGTTACTAAGCCAATCAGAAGAAGAATTCGGTTATGATCACCCAACTGGCGGTCTCACAATTCCTTGCAGCGAGGATGCCTTCCTGAACCTCACTTGTCAATTAAGTGGGCAGGATAGGATGCCAGAGAGGACCACATTTTGTGACTGTATCCCAACTTCTTCTGCACTTGGAGGGCATGAAATATGGTCCCACATCCTAGCCAAACATTTCAATATATCACAAGCTTGGCTCAACAAGTCTTGGATTGAAGGTTGGTTCAAGTATGAAACGGGGATCACAAACCGCTTCTGTTTCTCTCCGACATACACTGCTAGATGCCCCTTTGGGACTTCCACAGATTTAGAAGCTGCTTGGCTAGCTGAGAATGATGATGTCCTTCGAATAACAGGTATTAGAAAAGCAACAAAGAGCAATGATGTCCCCAAAGGCTATCTTGCAGTTTATGTTGGAGACAAAATGAAGAGGCTTTTAATTCCTATATCATACTTGAACCAACCTTTGTTTCTAGAATTGCTAAACCAAGCAGAAGAAGAGTTCGGCTATGATCATCCGAATGGTGGTCTCACAATTCCATGCGGGGAGGATGAGTTCTTAAACCTCACTTCTCAGTTGAGTAGGCTATAA 777 0.4247 MAFRIPSIRKASLSASKGTNVPKGYLAVYVGDKMRRFLIPVYYLNQPLFQELLSQSEEEFGYDHPTGGLTIPCSEDAFLNLTCQLSGQDRMPERTTFCDCIPTSSALGGHEIWSHILAKHFNISQAWLNKSWIEGWFKYETGITNRFCFSPTYTARCPFGTSTDLEAAWLAENDDVLRITGIRKATKSNDVPKGYLAVYVGDKMKRLLIPISYLNQPLFLELLNQAEEEFGYDHPNGGLTIPCGEDEFLNLTSQLSRL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00846 258 PANTHER AUXIN-INDUCED PROTEIN 10A5 183 256 - -
Aip03g00846 258 PANTHER AUXIN-INDUCED PROTEIN 10A5 12 86 - -
Aip03g00846 258 Pfam Auxin responsive protein 185 253 IPR003676 GO:0009733
Aip03g00846 258 Pfam Auxin responsive protein 10 84 IPR003676 GO:0009733
Aip03g00846 258 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 12 86 IPR003676 GO:0009733
Aip03g00846 258 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 183 256 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00846 Aip-Chr3 8141534 8144897 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00846 20 78 Calmodulin-binding Proteins AT3G43120 57.627 3.08e-18 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00846 K14488 - gmx:112997918 199.904