Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00844 ATGGGTTTTCGGTTACCCGGTATTGTAAGAAAGGCATCATTTACTTCATCTTCAAAAGCTATGGAAATTCCAAAAGGTTATCTTGCAGTTTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCCATATCATACTTGAACCAGCCTTCATTTCAAGACTTGCTAAGTCAAGCTGAGGAAGAATTTGGTTATGATCATCCAATGGGTGGCCTCACAATTCCTTGTGAAGAAAATATGTTCTTAGATATCACTTCTCGCTTGAGTTGA 267 0.3858 MGFRLPGIVRKASFTSSSKAMEIPKGYLAVYVGEKMKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCEENMFLDITSRLS 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00844 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 87 IPR003676 GO:0009733
Aip03g00844 88 Pfam Auxin responsive protein 16 86 IPR003676 GO:0009733
Aip03g00844 88 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00844 Aip-Chr3 8136350 8136616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00844 22 80 Calmodulin-binding Proteins AT3G43120 55.932 3.05e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00844 K14488 - gmx:100806671 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00844 03 8136350 8136616 Aip03g00844 03 8136350 8136616 ECH