Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00843 ATGGCTTTCCGCATTCCAGGTATTAGACGGGCCACATCTTTCTCTGCATCCAAGGGAACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTAGGAGATAAGATGAAGCGGTTTGTGATTCCGGTATCATACTTGAATCAGCCTTCATTTCAAGAATTACTGTGCCAGGCCGAAGAGGAATTCGGATATGATCATCCAACTGGTGGTTTGACAATTCCATGCAGTGAGGATGAGTTTCAAAACCTCACTTCTGAATTAAGTGGACAGTAA 270 0.4296 MAFRIPGIRRATSFSASKGTNVPKGYLAVYVGDKMKRFVIPVSYLNQPSFQELLCQAEEEFGYDHPTGGLTIPCSEDEFQNLTSELSGQ 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00843 89 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 5 87 IPR003676 GO:0009733
Aip03g00843 89 Pfam Auxin responsive protein 16 84 IPR003676 GO:0009733
Aip03g00843 89 PANTHER AUXIN-INDUCED PROTEIN 10A5 5 87 - -
Aip03g00843 89 Coils Coil 89 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00843 Aip-Chr3 8134877 8135294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00843 21 82 Calmodulin-binding Proteins AT3G43120 54.839 2.69e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00843 K14488 - gmx:100782363 147.132