Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00842 ATGGGTTTTCTTTTGGCTGGTATCAGAAGAAAGACATCATTTACTGCAAACCAAGCAACTTCCAAAGTTGTGGAAGTCCCGAAAGGCTATCTTGCCATGTATGTTGGCGAGAAGATGAAGCGATTTGTGGTTCCCATTTCTTATTTGAATCAACCTTTATTTCAAGAATTACTAAGCCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGTCTCACTATTCCATGCAGTGAGGATGCTTTCTTGGACCTCACATCTCGCTTAAACTGA 276 0.4058 MGFLLAGIRRKTSFTANQATSKVVEVPKGYLAMYVGEKMKRFVVPISYLNQPLFQELLSQAEEEFGYDHPMGGLTIPCSEDAFLDLTSRLN 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00842 91 Pfam Auxin responsive protein 10 89 IPR003676 GO:0009733
Aip03g00842 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 4 91 IPR003676 GO:0009733
Aip03g00842 91 PANTHER AUXIN-INDUCED PROTEIN 6B 4 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00842 Aip-Chr3 8133498 8134089 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00842 15 83 Calmodulin-binding Proteins AT3G43120 49.275 9.36e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00842 K14488 - gmx:100806671 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00842 03 8133498 8134089 Aip03g00842 03 8133498 8134089 ECH