Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00841 ATGGCAACTATATATACACTTCTTCTTGTGTTCTCAACCAACACAAATCAGTTGCATCTCCTCAAGTATCAAGAACTTACATTTTTCTCTCATACAAATCCCTCAGGAACAATGGCTTTCCGCATTCCAGGTATTAGAAAGGCATCACTTTCTGCATCAAAAGGGACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTGGGAGATAAGATGAGGCGGTTTGTGATTCCTGTATGTTACTTGAACCAATCTTCATTTCAAGAATTACTAAACCAAGCAGAAGAAGAATTTGGATACGAACATCCAACTGGTGGTCTCAAAATTCCATGCAGTGAGGATGAATTCCTAAACCTCACTTTTCAAATGGTTGGGCAGTAA 378 0.3889 MATIYTLLLVFSTNTNQLHLLKYQELTFFSHTNPSGTMAFRIPGIRKASLSASKGTNVPKGYLAVYVGDKMRRFVIPVCYLNQSSFQELLNQAEEEFGYEHPTGGLKIPCSEDEFLNLTFQMVGQ 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00841 125 Pfam Auxin responsive protein 48 118 IPR003676 GO:0009733
Aip03g00841 125 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 49 122 IPR003676 GO:0009733
Aip03g00841 125 PANTHER AUXIN-INDUCED PROTEIN 10A5 49 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00841 Aip-Chr3 8132483 8132860 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00841 57 115 Calmodulin-binding Proteins AT3G43120 55.932 4.29e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00841 K14488 - gmx:100786685 134.806