Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00840 ATGGGATTTCGCTTACCTGCTATTAGAAGGGCATCATCTGCTGTAACCCAAGCAGCCTCCGTCCCAAAAGGCTATCTTGCAGTCTATGTTGGAGAGAAGATGAAGCGGTTTGTGATTCTTATTTCCTATTTGAGTCAACCTTCATTTCAGGAGTTACTAATCCAAGCAGAAGAAGAATTCGGATATGGTCATCCAATGGGTGGCCTCACTATTCCTTGCAAGGAGAATGCTTTCGTGGATCTCACGTCTCGCTTGAATGGACTATAG 267 0.4457 MGFRLPAIRRASSAVTQAASVPKGYLAVYVGEKMKRFVILISYLSQPSFQELLIQAEEEFGYGHPMGGLTIPCKENAFVDLTSRLNGL 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00840 88 Pfam Auxin responsive protein 15 84 IPR003676 GO:0009733
Aip03g00840 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 12 87 IPR003676 GO:0009733
Aip03g00840 88 PANTHER AUXIN-INDUCED PROTEIN 10A5 12 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00840 Aip-Chr3 8130511 8131586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00840 20 78 Calmodulin-binding Proteins AT3G43120 54.237 1.37e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00840 K14488 - gmx:100806671 146.362