Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00839 ATGGGTTTCCGTTTACCTGTTATTCGAAGGGCATCATCATTCTCAGCTAGCGAAGCAGCTTCAAAATCTGTGGAACTCCCAAAAGGGTATCTTGCAGTGTATGTTGGAGAGAATCAAAAGCGTTTTGTGATCCCCGTATCATACTTGAACCAACCTTCATTCCAAGACTTGTTGAGTCAAGCTGAAGAAGAATTTGGATATGATCATCCCATGGGAGGTCTCACTATTCCTTGTAGTGAACATGTCTTCCAACGGATCACTTCTCGCTTGAATGGGCTATAA 282 0.4291 MGFRLPVIRRASSFSASEAASKSVELPKGYLAVYVGENQKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEHVFQRITSRLNGL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00839 93 Pfam Auxin responsive protein 12 90 IPR003676 GO:0009733
Aip03g00839 93 PANTHER AUXIN-INDUCED PROTEIN 6B 2 91 - -
Aip03g00839 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 2 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00839 Aip-Chr3 8129682 8129963 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00839 25 84 Calmodulin-binding Proteins AT3G43120 53.333 7.90e-18 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00839 K14488 - gmx:100816803 155.606