Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00838 ATGGGGTTTCGCATACTAGGCACAAGAAGGGCATCAATTTCTGCAACTGAAGTAAGTTCCAAGCGATTTGTAGTCCCAAAAGGCTATCTTGCAGTCTATGTCGGAGACAAAATGAGGAGGTTCATGATTCCGATATCATACTTGAATGAACCTTCATTTCAAGCATTACTAAGTCAGGCAGAAGATGAATATGGATATGATCATCCGGCAGGTGGTCTCACTATTCCATGCAGGGAGGATGAGTTTCTAAACATCACTTCTGGCTTAAATGGGTTATAA 279 0.4158 MGFRILGTRRASISATEVSSKRFVVPKGYLAVYVGDKMRRFMIPISYLNEPSFQALLSQAEDEYGYDHPAGGLTIPCREDEFLNITSGLNGL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00838 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 91 IPR003676 GO:0009733
Aip03g00838 92 PANTHER AUXIN-INDUCED PROTEIN 10A5 8 91 - -
Aip03g00838 92 Pfam Auxin responsive protein 9 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00838 Aip-Chr3 8126189 8126659 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00838 25 82 Calmodulin-binding Proteins AT3G43120 58.621 8.82e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00838 K14488 - gmx:100786095 149.058