Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00837 ATGGGATTTCGCTTACCTGGTATTAGAAAAGCAACACAAGCAGCTTCAAAGGGTGGAGAAATTCCAAAGGGGTATCTTGCAGTGTATGTAGGAGAAAAGATGAAGAGGTTTATAGTTCCGATATCATACTTGAACCAACCATCATTTCAAGACTTGCTGAGTAAAGCAGAAGAAGAATTTGGTTATGTTCATCCAATGGGTGGCCTCACAATTCCTTGCACAGAAGATTTGTTCTGCAGCATCATATCAATTTTGGATTGA 261 0.3946 MGFRLPGIRKATQAASKGGEIPKGYLAVYVGEKMKRFIVPISYLNQPSFQDLLSKAEEEFGYVHPMGGLTIPCTEDLFCSIISILD 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00837 86 Pfam Auxin responsive protein 15 85 IPR003676 GO:0009733
Aip03g00837 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 85 IPR003676 GO:0009733
Aip03g00837 86 PANTHER AUXIN-INDUCED PROTEIN 6B 6 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00837 Aip-Chr3 8125245 8125505 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00837 13 78 Calmodulin-binding Proteins AT3G43120 50.000 1.52e-17 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00837 K14488 - gmx:100797634 138.658