Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00835 ATGACTGAATTACTCAGCAATCCAAATACTATGAAAAGGGCTAAAAGAGAGCTTGAAGAAACCATTGGAAAGGGAAACCAAGTTGAGGAATCAGACATAGCAAGATTACCATATTTAGAAGCAATATTGAAAGAGACATTTCGTTTGCCCCCTTCAGTGCCATTTTTGATCCCAAGAAAAGCTGACACTGATGTAGAAATCAATGGCTATACTATACCAAAAGGTTCACAATTGCTAATCAATGTTTATGCTATTGGAAGGGATTCAAATGTGTGGAAGAATGACACGAATTTGTTCTCACCAGAGAGGTTCTTGGGATTAGAAACTCATGTTAAAGGGAGGCATTTTGAGTTGATACCATTTGGTGCTGGTAGAAGAATATGTCCTGCTTTATCATATGCTATGAAGATTTTGTTCTTGATGTTAGGCTCATTGCTTAATTGTTTTGATTGGAAGCTTGAAAATGATTCGAAAGCTGAGGATATTGATAAAAAACAAGAATTTGGAATATCATTAAGAAAGGCTAAACCCCTGAGAGCCATTCCAATCAAAGTAAATAACTAA 564 0.3582 MTELLSNPNTMKRAKRELEETIGKGNQVEESDIARLPYLEAILKETFRLPPSVPFLIPRKADTDVEINGYTIPKGSQLLINVYAIGRDSNVWKNDTNLFSPERFLGLETHVKGRHFELIPFGAGRRICPALSYAMKILFLMLGSLLNCFDWKLENDSKAEDIDKKQEFGISLRKAKPLRAIPIKVNN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00835 187 Coils Coil 11 31 - -
Aip03g00835 187 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 186 - -
Aip03g00835 187 SUPERFAMILY Cytochrome P450 1 182 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00835 187 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00835 187 PRINTS P450 superfamily signature 119 128 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00835 187 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00835 187 Gene3D Cytochrome P450 1 184 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00835 187 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 121 130 IPR017972 GO:0005506|GO:0016705
Aip03g00835 187 Pfam Cytochrome P450 2 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00835 187 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 186 - -
Aip03g00835 187 PRINTS E-class P450 group I signature 118 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00835 187 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00835 187 PRINTS E-class P450 group I signature 128 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00835 Aip-Chr3 8083392 8083955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00835 1 184 Cytochrome P450 AT1G33720 55.978 3.23e-71 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00835 - - ahf:112735734 377.481