Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00829 ATGGGGTCTAGAAAGACAAGGACTCATGAACCTTCACATGCTGCTGTCTCTTGGAGACCAACACAAAAGATGGGTTTCCCTTTACCTGCTATTCGAAGGGCTTCCTTCTCTGCTAGTCAATCATCTTCAAAATCCTTGGAAGCCCCAAAGGGGTATCTTGCAGTGTATGTTGGAGAGAAGCAGAAGCGTTTTCTGATCCCTGTATCATATTTGAACCAACCATCATTCCAAGACTTGTTGAGTCAAGCCGAATAA 255 0.4431 MGSRKTRTHEPSHAAVSWRPTQKMGFPLPAIRRASFSASQSSSKSLEAPKGYLAVYVGEKQKRFLIPVSYLNQPSFQDLLSQAE 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00829 84 Pfam Auxin responsive protein 32 84 IPR003676 GO:0009733
Aip03g00829 84 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 30 84 IPR003676 GO:0009733
Aip03g00829 84 PANTHER AUXIN-INDUCED PROTEIN 10A5 30 84 - -
Aip03g00829 84 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00829 Aip-Chr3 8051622 8052551 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00829 1 84 Calmodulin-binding Proteins AT3G43120 34.524 1.86e-09 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00829 - K14488 gmx:100816803 90.5077