Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00828 ATGGGATTTCGCTTACCTGGTATTAGAAAATCTACACAAGCAGCTTCAAAGGGTGGAGAAGTCTCAAAGGGGCATCTTGCAGTTTATGTTGGAGAAAAGATGAAGAGGTTCATAGTTCCAATATCATATTTGAACCAACCATCATTTCAAGACTTGCTGAATAAAGCAGAAGAAGAATTTGGTTATGTTCATCCAATGGGTGGCCTCACAATTCCTTGCACAGAAGATGTGTTCTTAGATATCATATCATTTTTTGCTTGA 261 0.3793 MGFRLPGIRKSTQAASKGGEVSKGHLAVYVGEKMKRFIVPISYLNQPSFQDLLNKAEEEFGYVHPMGGLTIPCTEDVFLDIISFFA 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00828 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 7 85 IPR003676 GO:0009733
Aip03g00828 86 MobiDBLite consensus disorder prediction 1 20 - -
Aip03g00828 86 PANTHER AUXIN-INDUCED PROTEIN 6B 7 85 - -
Aip03g00828 86 Pfam Auxin responsive protein 15 83 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00828 Aip-Chr3 8051192 8051452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00828 10 78 Calmodulin-binding Proteins AT5G20810 49.275 1.91e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00828 K14488 - gmx:100806671 134.806