Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00827 ATGGGTTTCCGTTTGCCTGGTCTTCAAAGGCGCAATGACATCCCAAAGGGTCACCTTGCAGTTTATGTAGGAGAAAATCAAAAGAAGCGATTTGTGATTCCTATATCATTCTTGAGTCAACCTTCAATTCAAGACTTACTAAGTCATGCTGAACAAGAATTTGGATTTGACCACCCAATGGGTGGGCTCACAATACCTTGCAAAGAAGATGTCTTCCTTGAGATCACTTCTCAGTTGCATAAGTCATAG 249 0.4137 MGFRLPGLQRRNDIPKGHLAVYVGENQKKRFVIPISFLSQPSIQDLLSHAEQEFGFDHPMGGLTIPCKEDVFLEITSQLHKS 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00827 82 PANTHER - 13 79 - -
Aip03g00827 82 Pfam Auxin responsive protein 11 77 IPR003676 GO:0009733
Aip03g00827 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 79 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00827 Aip-Chr3 8042409 8043194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00827 13 72 Calmodulin-binding Proteins AT3G43120 55.000 2.43e-16 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00827 K14488 - gmx:112997797 144.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00827 03 8042409 8043194 Aip03g00827 03 8042409 8043194 ECH