Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00824 ATGGGTTTCCGTTTAACTGCTATTCGAAGAACATCCTCGTTCTCAGGTAGGCAAGCAGCTTCAAAATCTGTAGAAGTCCCAAAGGGGTATCTTGCAGTGTATGTCGGAGAAAACCAGAAGCGTTTTGTGATCCCCATTTCATATTTGAACCAACCTTCATTCCAAGACCTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGAGAAGCTTCTGGAACTTCCCTTCGACTTCAAGGAGCTTTCCCAACCTCTTGGGTGACACTGGCTTGTGATCATGCTAGTATGCTACGGGTTCTCTTGTTTCCCTTAGTTAGCACTTGGCAGCTACTTGCTAGTATTGAGTTGCATTATTAA 366 0.4454 MGFRLTAIRRTSSFSGRQAASKSVEVPKGYLAVYVGENQKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGEASGTSLRLQGAFPTSWVTLACDHASMLRVLLFPLVSTWQLLASIELHY 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00824 121 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 4 77 IPR003676 GO:0009733
Aip03g00824 121 Pfam Auxin responsive protein 13 70 IPR003676 GO:0009733
Aip03g00824 121 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 4 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00824 Aip-Chr3 8037234 8038886 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00824 18 69 Calmodulin-binding Proteins AT3G43120 51.923 8.48e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00824 - K14488 aip:110269930 129.413