Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00818 ATGGCCGCTACTTCACTTTCAAACCTCTCTTCTTCTCTCTCATCAACCGCTGCCGCCACCACCACCACCACCGCGCTCTCCAAACCCTCCTCTCTCCCTCTCTTCCACAACAAAACCCTCCCTAAACCCACCGCCACCACGATAACACGCGCCGCCACATCCCACAACCACAACCCAATCCCCAAACCACAACAGCACCAACACTCGTCTCCCTTCTCCTTCTCCGATGACGACGAAAAGCCACGCGAAGAGTGCGGCGTCGTTGGAATCTACGGCGACCCCGAAGCCTCCCGCCTCTGCTACCTCGCACTCCACGCTCTACAGCACCGCGGCCAAGAAGGCGCCGGAATAGTAACCGTCAACAACAACGTCCTCCAATCCATCACCGGCGTCGGCCTCGTCTCCGACGTCTTCAACGAGTCCAAGCTCGACCAGCTCTCCGGCTCTCTCGCCATCGGCCATGTCCGTTACTCCACCGCCGGACAGTCCATGCTCAAGAACGTCCAGCCTTTCGTCGCCGGATACCGCTTTGGCTCCGTCGGCGTGGCTCACAATGGTAATCTCGTAAATTACCGAACCTTGAGGGCAAAACTGGAAGACAACGGTTCCATCTTCAACACAACGTCTGATACTGAGGTGGTTCTTCACCTCATCGCAACTTCGAAGCACCGACCTTTTATTCTGAGAATCGTTGACGCCTGTGAGAAGCTCGAAGGTGCGTATTCAATGGTGTTTGTTACAGAGGACAAGCTTGTTGCTGTTAGGGACCCGTTTGGATTTAGGCCTTTGGTTATGGGAAGAAGAAGCAACGGTTCTGTGGTTTTTGCTTCTGAAACTTGCGCTCTTGATTTGATTGAAGCTACTTACGAAAGAGAAGTGTACCCTGGCGAGGTTATTGTTGTGGACAACAATGGAATTCAGAGTCTCTGCCTCATGTCAGTGTATGAATCTAGAAGGCAATTTGGTGAGATTCTTGCAACCGAGAGCCCTGTTGATTGTGATGTTGTGATAGCTGTGCCTGATTCTGGTGTTGTTGCGGCGCTTGGATACGCCGCGAAAGCCGGTGTCCCCTTCCAGCAGGGGCTAATTAGGTCCCACTATGTTGGGAGGACCTTTATTGAGCCTTCTCAGAAGATTAGGGACTTTGGCGTGAAGCTTAAGCTATCGCCGGTTCGCGCGGTTCTAGAAGGGAAGAGAGTTGTGGTGGTGGATGATTCAATTGTGAGAGGAACAACATCATCAAAGATTGTGAGGTTGTTGAAGGAGGCTGGTGCCAAAGAGGTTCACATGAGGATTGCAAGCCCACCAATCATTGGTTCTTGTTACTATGGTGTGGATACTCCAAGCTCTGAGGAGTTGATTTCTAATAGGATGAGCGTTGAGGAGATTAGGGATTTTATTGGTTCTGATTCACTTGCTTTTCTTCCATTTGATAGCTTGAGGAATTTGTTGGGCCATGAGTCCCCAAAGTTCTGTTATGCTTGTTTCTCTGGGAAGTACCCTGTTGAGCCAAGAGAACTTAAGGTGAAGAGGGTTGGTGACTTTGTTGATGATGGGTTGAATGGGAGTTTGGAAACCATTGATGGTGGCTGGGTTCAGGCAACAACACCACCACAACCAACAAGAACTCCTAAAGAGGTTAAGGCTGCTGGTACTGTTTTTTGA 1665 0.5069 MAATSLSNLSSSLSSTAAATTTTTALSKPSSLPLFHNKTLPKPTATTITRAATSHNHNPIPKPQQHQHSSPFSFSDDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVNNNVLQSITGVGLVSDVFNESKLDQLSGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEDNGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSMVFVTEDKLVAVRDPFGFRPLVMGRRSNGSVVFASETCALDLIEATYEREVYPGEVIVVDNNGIQSLCLMSVYESRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIRDFIGSDSLAFLPFDSLRNLLGHESPKFCYACFSGKYPVEPRELKVKRVGDFVDDGLNGSLETIDGGWVQATTPPQPTRTPKEVKAAGTVF 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00818 554 Pfam Glutamine amidotransferase domain 163 282 IPR017932 -
Aip03g00818 554 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 313 532 - -
Aip03g00818 554 MobiDBLite consensus disorder prediction 40 71 - -
Aip03g00818 554 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 53 312 - -
Aip03g00818 554 Gene3D - 320 482 IPR029057 -
Aip03g00818 554 Hamap Amidophosphoribosyltransferase [purF]. 84 500 IPR005854 GO:0004044|GO:0009113
Aip03g00818 554 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 85 308 IPR029055 -
Aip03g00818 554 Pfam Phosphoribosyl transferase domain 334 429 IPR000836 -
Aip03g00818 554 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 85 304 IPR017932 -
Aip03g00818 554 CDD GPATase_N 85 310 IPR035584 -
Aip03g00818 554 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 313 532 - -
Aip03g00818 554 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 53 312 - -
Aip03g00818 554 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 85 319 IPR029055 -
Aip03g00818 554 SUPERFAMILY PRTase-like 313 506 IPR029057 -
Aip03g00818 554 MobiDBLite consensus disorder prediction 1 81 - -
Aip03g00818 554 CDD PRTases_typeI 322 433 IPR000836 -
Aip03g00818 554 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00818 Aip-Chr3 7968951 7970690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00818 70 533 PRT Gene Family AT2G16570 80.730 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00818 K00764 - gmx:100791919 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00818 03 7968951 7970690 Aip03g00818 03 7968951 7970690 ECH