Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00802 ATGGAGTTTTTTCTACACTCTACTTTTCAATCTTCAACCAACATTTTTATTTTCTTCTGTGTCTTGGCTTTCACTGTCTTCTTCATCTTTCGACTTCGCCGAAAGCTGCCATACCCACCAGGCCCAAAAGGGCTACCCATCATAGGAAACATGTTGATGATGGACCAACTTACCCATCGGGGCCTGGATAAGCTCGCCAAACAATACGGTGGGCTTGTTCATCTCCAAATGGGCTCCCTCCATATAGTGGCAATATCAACACCACAGATGGCCCGTGAGGTTCTCCAGGCCCAAGATAGCGCTTTCTCAAACCGGCCCGCAAATGTTGCAATTTCTTACTTGACATACGACCGGGCCGACATGGCTTTCGCAAACTACGGCCCGTTTTGGCGGCAGATGCGTAAGATCTGTGTAATGAAGCTTTTTAGTCGCAAGCGGGCCGAGTCATGGGCCTCGGTTCGTGAAGAAGTTGAAGAAACGGTTCGAAGCATATCAGCGAACGTTGGTTCAGCCATGAATTTGGGTGAATTGATTTTTGCTCTAACGAGGAGGGTCACCTATAAGGCCGCGTTTGGTGCGAGTTTAAATAAGGGGGAAGAGGAATTCATGGGAATCTTACAAGAGTTTTCAAAGCTTTTTGGAGCTTTTAACATTGCAGATTTCATTCCGTGGTTGGGTTGGTTGCATGCACAAGATTTTCACAAGAGAATGGTCAATGCACGAAAAGCACTTGATGTGTTTATTGATGAGATCATTGATGATCATATCAAAAAGAGGAACATCAACATGGGGAATGATAATGATGCAGATAAGGATATGGTTGATGAGCTTATGGATTTTCTTAATGAAGGTAGTGTTGGTGATGATGCTGTGAAGCCAAACAATTCACCATCAATCCTTAAGCTTACTAGAGACAATATCAAAGCTCTTATCATGGATGTCATGTTTGGAGGAACTGAGACAGTAGCATCAGTGATTGAATGGATTATGGCAGAGCTTTTGAGAAGCCCAATGGACCTTCACAAGGTCCAACAAGAGCTTGTTGATGTGGTGGGCTTGGACCGAAGGTTCAATGAATCGGATCTCGAAAAGTTGACTTTCCTCAAGTGCGTGGTCAAAGAAGCCTTGCGTCTCCACCCTCCAATTCCAATGGCTCTTCACGAGAGCGCAGAGGACAGCGTAATTGAGGGTTACGCAATCCCAAAGGGGACACGTGTCTGGATCAACGCGTGGTCTATAGGACGCGACAGCAGCGCGTGGGATGAGCCAGAGACATTCAATCCTTCAAGATTCTTGCGAGAAGCGGCACCCGATTTCAAAGGAAGCGATTTCGAGTTCATTCCATTTGGGTCGGGTCGAAGGTCATGCCCAGGGATGCAACTTGGGCTTTATACCGTGGAGTTAACTGTGGCTCATTTGCTTCATTGCTTCAATTGGGAGTTGCCCAATGGAATGAAGCCCGAGGATCTTGATATGAATGATACTTTTGGGCTCACAGCTCCAAGAGCAGTTCAACTTGTTGCGGTACCTACTTATCGTCTCAAGTGCCCCCTTTATTAA 1560 0.4609 MEFFLHSTFQSSTNIFIFFCVLAFTVFFIFRLRRKLPYPPGPKGLPIIGNMLMMDQLTHRGLDKLAKQYGGLVHLQMGSLHIVAISTPQMAREVLQAQDSAFSNRPANVAISYLTYDRADMAFANYGPFWRQMRKICVMKLFSRKRAESWASVREEVEETVRSISANVGSAMNLGELIFALTRRVTYKAAFGASLNKGEEEFMGILQEFSKLFGAFNIADFIPWLGWLHAQDFHKRMVNARKALDVFIDEIIDDHIKKRNINMGNDNDADKDMVDELMDFLNEGSVGDDAVKPNNSPSILKLTRDNIKALIMDVMFGGTETVASVIEWIMAELLRSPMDLHKVQQELVDVVGLDRRFNESDLEKLTFLKCVVKEALRLHPPIPMALHESAEDSVIEGYAIPKGTRVWINAWSIGRDSSAWDEPETFNPSRFLREAAPDFKGSDFEFIPFGSGRRSCPGMQLGLYTVELTVAHLLHCFNWELPNGMKPEDLDMNDTFGLTAPRAVQLVAVPTYRLKCPLY 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00802 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Aip03g00802 519 Pfam Cytochrome P450 39 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00802 519 Gene3D Cytochrome P450 31 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00802 519 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00802 519 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00802 519 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00802 519 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00802 519 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00802 519 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00802 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00802 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00802 519 SUPERFAMILY Cytochrome P450 39 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00802 519 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 9 518 - -
Aip03g00802 519 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00802 519 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00802 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g00802 519 PANTHER CYTOCHROME P450 84A1-RELATED 9 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00802 Aip-Chr3 7787642 7790619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00802 46 518 Monolignol Biosynthesis Gene Families AT4G36220 66.807 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00802 K09755 - zju:107426594 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00802 03 7787642 7790619 Aip03g00802 03 7787642 7790619 ECH