Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00784 ATGGATGACGCCAGGCCTACCTTCGTTTGGGGCACGAACATCAGCGTTGAGGACGTTAACGACGCGATTCAGAGATTCCTGAGGGACTTTCGAGAAGCTTCTTCGTCACAGAATGATGATGACATGTTGCAGCACTTGCATACCGATGGGAAGTACGAGAAGCTCATCAAACAGGTGATTGAAGTGGAGGGAGATTCCCTTGATGTTGATGCGCATGATGTGTTCGAACATGACCCTGATTTGTACACCAAGATGGTTAGGTACCCTCTCGAGGTTCTTGCGATCTTTGACTTGGTTCTTATGAATATGGTTAGCAGGATTAAGCCTATGTTCGAGAAGCACATTCAGACTCGGATTTTCAATCTCAAATCCTCCACTACAATGAGGAATTTGAATCCTACTGATATTGAGAGGATGGTGTCAATAAAGGGTATGATTATACGGTGTAGCTCAATCATACCGGAAATTAGGGAAGCTATATTTAGGTGTCTTGTGTGTGGGAACTGCACCGACCCTGTTGCTGTAGAGAGAGGACGTATAACCGAGCCAACTATATGCTTGAGAGAAGAGTGTCAATCCAGGAACTCCATGACACTGCTTCACAACCGATGCAGGTTTACTGATAAGCAAATTGTGAGGCTCCAGGAGACACCTGATGAGATACCTGAAGGTGGAACTCCTCACACAGTCAGCTTGCTAATGCATGACAAGCTGGTAGATGCTGGAAAGCCTGGAGATAGAGTTGAGGTGACTGGTATATATAGAGCTATGAGTGTCAGAATTGGATCAACTCAGCGAACTGTGAAATCATTGTTCAAGACGTATATTGATTGTCTTCACATAAAGAAGACTGATAAGTCAAGGATGCTGGTAGACGATGCTATGGACATTGACAATAGCGAGGGCAGAAATCCAGAAGAGGTTCACTTTGATGAAGAAAGGGTGGGTCAACTGAAAGAGCTCTCAAAACAGCCAGATATATATGAAAGATTGACAAAATCATTGGCACCAAATATCTGGGAACTAGACGATGTGAAAAAAGGTCTTCTTTGTCAGCTTTTTGGTGGCAATGCTTTGAAGTTGGCATCTGGTGCTAGCTTCCGTGGTGATATCAATATTCTTCTTGTTGGTGATCCTGGTACTAGCAAGTCTCAGCTTCTTCAATACATTCACAAACTATCTCCTCGTGGCATTTACACTAGTGGAAGGGGGAGTTCTGCAGTTGGATTGACTGCTTACGTGACCAAGGACCCTGAAACAGGGGAAACTGTTCTTGAAAGTGGTGCCCTAGTTTTGAGTGACCGAGGTATTTGCTGTATAGATGAATTTGACAAAATGTCTGACAATGCAAGGAGCATGTTACATGAGGTGATGGAACAGCAAACTGTTTCTATAGCGAAGGCTGGTATTATTGCTTCTCTCAATGCTAGGACTTCCGTGTTGGCTTGTGCAAATCCAAGTGGGTCACGATATAATCCTCGCTTGTCTGTCATTGACAACATACACCTGCCTCCCACTCTTTTGTCCAGGTTCGATTTAATTTACTTAATTCTTGACAAGGCTGATGAACAGACTGACCGGCGACTTGCCAAACATATTGTTTCCTTACACTTCGAGAATCCCGAGAGCATGGAGCAAGATGTGATGGACATATCTACCTTGACTGATTATGTGAGCTATGCCCGAAAGCACATACACCCCCAGCTGTCTGATGAAGTTGCCGAAGAATTGACTAGAGGTTATGTGGATATAAGAAGAAGAGGAAACTTTCCTGGAAGTAGCAAAAAGGTGATAACAGCAACGCCAAGACAGCTTGAGAGTCTGATACGCCTTAGTGAAGCATTGGCCCGGATTCGCTTCGCAGAATGGGTTGAAAAGCGTGATGTAATGGAGGCATTTCGGCTTCTTGAAGTTGCAATGCAGCAGTCTGCAACGGATCACGCTACTGGAACTATCGACATGGATCTTATTACTACTGGAGTTTCGGCAAGTGAAAGGATGAGACGAGAAGCTATGGTACAAGCAACCCGCAACATAATCATGGAGAAGATGCAAATTGGGGGACCATCCATGCGATTATTGGAGCTATTGGAAGAGTTAAAACAGAGCACTGGCAGTGAAGTTCAACTTACTGATCTAAAGAATGCAGTTGCTACTCTCGCCAGTGAAGGATTCGTTACCATGCATGGTGAAAGCGTTAAAAGATCATGA 2211 0.4428 MDDARPTFVWGTNISVEDVNDAIQRFLRDFREASSSQNDDDMLQHLHTDGKYEKLIKQVIEVEGDSLDVDAHDVFEHDPDLYTKMVRYPLEVLAIFDLVLMNMVSRIKPMFEKHIQTRIFNLKSSTTMRNLNPTDIERMVSIKGMIIRCSSIIPEIREAIFRCLVCGNCTDPVAVERGRITEPTICLREECQSRNSMTLLHNRCRFTDKQIVRLQETPDEIPEGGTPHTVSLLMHDKLVDAGKPGDRVEVTGIYRAMSVRIGSTQRTVKSLFKTYIDCLHIKKTDKSRMLVDDAMDIDNSEGRNPEEVHFDEERVGQLKELSKQPDIYERLTKSLAPNIWELDDVKKGLLCQLFGGNALKLASGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPESMEQDVMDISTLTDYVSYARKHIHPQLSDEVAEELTRGYVDIRRRGNFPGSSKKVITATPRQLESLIRLSEALARIRFAEWVEKRDVMEAFRLLEVAMQQSATDHATGTIDMDLITTGVSASERMRREAMVQATRNIIMEKMQIGGPSMRLLELLEELKQSTGSEVQLTDLKNAVATLASEGFVTMHGESVKRS 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00784 736 ProSitePatterns MCM family signature. 436 444 IPR018525 GO:0003677|GO:0005524|GO:0006260
Aip03g00784 736 PANTHER DNA REPLICATION LICENSING FACTOR MCM4 4 735 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aip03g00784 736 Gene3D - 128 267 IPR012340 -
Aip03g00784 736 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 489 506 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aip03g00784 736 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 641 650 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aip03g00784 736 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 343 354 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aip03g00784 736 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 150 163 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aip03g00784 736 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 201 213 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Aip03g00784 736 Pfam MCM P-loop domain 316 537 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aip03g00784 736 Gene3D - 155 207 - -
Aip03g00784 736 Gene3D - 646 731 IPR036388 -
Aip03g00784 736 SMART mcm 124 641 IPR031327 GO:0003677|GO:0005524|GO:0032508
Aip03g00784 736 Pfam MCM AAA-lid domain 553 639 IPR041562 -
Aip03g00784 736 ProSiteProfiles MCM family domain profile. 327 533 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aip03g00784 736 Pfam MCM N-terminal domain 22 124 IPR027925 -
Aip03g00784 736 Gene3D - 13 122 - -
Aip03g00784 736 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 338 654 IPR027417 -
Aip03g00784 736 Gene3D - 305 645 IPR027417 -
Aip03g00784 736 Pfam MCM OB domain 128 257 IPR033762 -
Aip03g00784 736 PRINTS Mini-chromosome maintenance (MCM) protein family signature 507 515 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aip03g00784 736 PRINTS Mini-chromosome maintenance (MCM) protein family signature 456 469 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aip03g00784 736 PRINTS Mini-chromosome maintenance (MCM) protein family signature 480 492 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aip03g00784 736 PRINTS Mini-chromosome maintenance (MCM) protein family signature 428 442 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aip03g00784 736 PRINTS Mini-chromosome maintenance (MCM) protein family signature 368 383 IPR001208 GO:0003677|GO:0005524|GO:0032508
Aip03g00784 736 SMART AAA_5 369 519 IPR003593 -
Aip03g00784 736 CDD MCM4 330 639 - -
Aip03g00784 736 SUPERFAMILY Nucleic acid-binding proteins 46 278 IPR012340 -
Aip03g00784 736 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 4 735 IPR031327 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00784 Aip-Chr3 7598845 7604242 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00784 6 735 Core DNA Replication Machinery Family AT2G16440 77.490 0.0 1190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00784 K02212 - gmx:100782586 1310.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00784 03 7598845 7604242 Aip03g00784 03 7598845 7604242 ECH